Protein–RNA interactions for Protein: Q9Y6M4

CSNK1G3, Casein kinase I isoform gamma-3, humanhuman

Predictions only

Length 447 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1G3Q9Y6M4 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
CSNK1G3Q9Y6M4 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
CSNK1G3Q9Y6M4 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC16.97■□□□□ 0.31
CSNK1G3Q9Y6M4 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
CSNK1G3Q9Y6M4 PMS2P2-201ENST00000425039 1128 ntBASIC16.97■□□□□ 0.31
CSNK1G3Q9Y6M4 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC16.97■□□□□ 0.31
CSNK1G3Q9Y6M4 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC16.97■□□□□ 0.31
CSNK1G3Q9Y6M4 MAL2-202ENST00000531508 892 ntTSL 3 BASIC16.97■□□□□ 0.31
CSNK1G3Q9Y6M4 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC16.97■□□□□ 0.31
CSNK1G3Q9Y6M4 AC096734.2-201ENST00000562054 433 ntBASIC16.97■□□□□ 0.31
CSNK1G3Q9Y6M4 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC16.97■□□□□ 0.31
CSNK1G3Q9Y6M4 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
CSNK1G3Q9Y6M4 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CSNK1G3Q9Y6M4 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CSNK1G3Q9Y6M4 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
CSNK1G3Q9Y6M4 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CSNK1G3Q9Y6M4 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC16.97■□□□□ 0.31
CSNK1G3Q9Y6M4 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC16.97■□□□□ 0.31
CSNK1G3Q9Y6M4 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
CSNK1G3Q9Y6M4 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC16.97■□□□□ 0.31
CSNK1G3Q9Y6M4 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
CSNK1G3Q9Y6M4 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
CSNK1G3Q9Y6M4 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
CSNK1G3Q9Y6M4 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
CSNK1G3Q9Y6M4 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
CSNK1G3Q9Y6M4 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC16.96■□□□□ 0.31
CSNK1G3Q9Y6M4 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CSNK1G3Q9Y6M4 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.31
CSNK1G3Q9Y6M4 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC16.96■□□□□ 0.31
CSNK1G3Q9Y6M4 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC16.96■□□□□ 0.31
CSNK1G3Q9Y6M4 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
CSNK1G3Q9Y6M4 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CSNK1G3Q9Y6M4 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CSNK1G3Q9Y6M4 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
CSNK1G3Q9Y6M4 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CSNK1G3Q9Y6M4 ENSA-206ENST00000361631 725 ntTSL 2 BASIC16.96■□□□□ 0.31
CSNK1G3Q9Y6M4 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CSNK1G3Q9Y6M4 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CSNK1G3Q9Y6M4 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC16.96■□□□□ 0.31
CSNK1G3Q9Y6M4 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC16.96■□□□□ 0.31
CSNK1G3Q9Y6M4 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC16.96■□□□□ 0.31
CSNK1G3Q9Y6M4 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC16.96■□□□□ 0.31
CSNK1G3Q9Y6M4 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC16.96■□□□□ 0.31
CSNK1G3Q9Y6M4 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC16.96■□□□□ 0.31
CSNK1G3Q9Y6M4 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CSNK1G3Q9Y6M4 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC16.96■□□□□ 0.31
CSNK1G3Q9Y6M4 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
CSNK1G3Q9Y6M4 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CSNK1G3Q9Y6M4 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
CSNK1G3Q9Y6M4 AP000997.3-201ENST00000623333 2250 ntBASIC16.96■□□□□ 0.31
CSNK1G3Q9Y6M4 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CSNK1G3Q9Y6M4 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.31
CSNK1G3Q9Y6M4 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CSNK1G3Q9Y6M4 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CSNK1G3Q9Y6M4 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CSNK1G3Q9Y6M4 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC16.96■□□□□ 0.3
CSNK1G3Q9Y6M4 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
CSNK1G3Q9Y6M4 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CSNK1G3Q9Y6M4 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
CSNK1G3Q9Y6M4 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CSNK1G3Q9Y6M4 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CSNK1G3Q9Y6M4 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CSNK1G3Q9Y6M4 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CSNK1G3Q9Y6M4 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC16.95■□□□□ 0.3
CSNK1G3Q9Y6M4 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CSNK1G3Q9Y6M4 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CSNK1G3Q9Y6M4 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CSNK1G3Q9Y6M4 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC16.95■□□□□ 0.3
CSNK1G3Q9Y6M4 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CSNK1G3Q9Y6M4 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
CSNK1G3Q9Y6M4 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CSNK1G3Q9Y6M4 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC16.95■□□□□ 0.3
CSNK1G3Q9Y6M4 IGLL3P-201ENST00000412472 434 ntBASIC16.95■□□□□ 0.3
CSNK1G3Q9Y6M4 AC018845.2-201ENST00000568326 409 ntBASIC16.95■□□□□ 0.3
CSNK1G3Q9Y6M4 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CSNK1G3Q9Y6M4 STK4-201ENST00000372801 2038 ntTSL 2 BASIC16.95■□□□□ 0.3
CSNK1G3Q9Y6M4 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CSNK1G3Q9Y6M4 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CSNK1G3Q9Y6M4 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CSNK1G3Q9Y6M4 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
CSNK1G3Q9Y6M4 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CSNK1G3Q9Y6M4 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
CSNK1G3Q9Y6M4 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
CSNK1G3Q9Y6M4 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CSNK1G3Q9Y6M4 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC16.95■□□□□ 0.3
CSNK1G3Q9Y6M4 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC16.95■□□□□ 0.3
CSNK1G3Q9Y6M4 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC16.95■□□□□ 0.3
CSNK1G3Q9Y6M4 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CSNK1G3Q9Y6M4 AC067852.2-201ENST00000590513 2313 ntBASIC16.95■□□□□ 0.3
CSNK1G3Q9Y6M4 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CSNK1G3Q9Y6M4 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CSNK1G3Q9Y6M4 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
CSNK1G3Q9Y6M4 FZD10-202ENST00000539839 3282 ntBASIC16.94■□□□□ 0.3
CSNK1G3Q9Y6M4 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC16.94■□□□□ 0.3
CSNK1G3Q9Y6M4 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CSNK1G3Q9Y6M4 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC16.94■□□□□ 0.3
CSNK1G3Q9Y6M4 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
CSNK1G3Q9Y6M4 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC16.94■□□□□ 0.3
CSNK1G3Q9Y6M4 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CSNK1G3Q9Y6M4 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms