Protein–RNA interactions for Protein: Q9Y696

CLIC4, Chloride intracellular channel protein 4, humanhuman

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4Q9Y696 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
CLIC4Q9Y696 AC073592.5-201ENST00000624854 528 ntBASIC19.8■□□□□ 0.76
CLIC4Q9Y696 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC19.8■□□□□ 0.76
CLIC4Q9Y696 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CLIC4Q9Y696 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CLIC4Q9Y696 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC19.8■□□□□ 0.76
CLIC4Q9Y696 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CLIC4Q9Y696 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC19.8■□□□□ 0.76
CLIC4Q9Y696 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
CLIC4Q9Y696 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC19.8■□□□□ 0.76
CLIC4Q9Y696 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CLIC4Q9Y696 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
CLIC4Q9Y696 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CLIC4Q9Y696 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC19.79■□□□□ 0.76
CLIC4Q9Y696 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CLIC4Q9Y696 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CLIC4Q9Y696 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CLIC4Q9Y696 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC19.79■□□□□ 0.76
CLIC4Q9Y696 CTNS-203ENST00000399306 803 ntTSL 3 BASIC19.79■□□□□ 0.76
CLIC4Q9Y696 BET1L-206ENST00000486280 665 ntTSL 3 BASIC19.79■□□□□ 0.76
CLIC4Q9Y696 KRT18P35-201ENST00000510488 1269 ntBASIC19.79■□□□□ 0.76
CLIC4Q9Y696 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC19.79■□□□□ 0.76
CLIC4Q9Y696 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC19.79■□□□□ 0.76
CLIC4Q9Y696 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC19.79■□□□□ 0.76
CLIC4Q9Y696 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC19.79■□□□□ 0.76
CLIC4Q9Y696 IL11-204ENST00000590625 1028 ntTSL 2 BASIC19.79■□□□□ 0.76
CLIC4Q9Y696 NPAP1P7-201ENST00000613027 823 ntBASIC19.79■□□□□ 0.76
CLIC4Q9Y696 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CLIC4Q9Y696 AP000550.4-202ENST00000639755 178 ntBASIC19.79■□□□□ 0.76
CLIC4Q9Y696 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC19.79■□□□□ 0.76
CLIC4Q9Y696 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC19.79■□□□□ 0.76
CLIC4Q9Y696 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CLIC4Q9Y696 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC19.79■□□□□ 0.76
CLIC4Q9Y696 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC19.79■□□□□ 0.76
CLIC4Q9Y696 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CLIC4Q9Y696 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
CLIC4Q9Y696 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC19.79■□□□□ 0.76
CLIC4Q9Y696 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CLIC4Q9Y696 EGFEM1P-202ENST00000431685 1563 ntBASIC19.78■□□□□ 0.76
CLIC4Q9Y696 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC19.78■□□□□ 0.76
CLIC4Q9Y696 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CLIC4Q9Y696 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
CLIC4Q9Y696 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
CLIC4Q9Y696 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC19.78■□□□□ 0.76
CLIC4Q9Y696 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
CLIC4Q9Y696 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC19.78■□□□□ 0.76
CLIC4Q9Y696 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CLIC4Q9Y696 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
CLIC4Q9Y696 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
CLIC4Q9Y696 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CLIC4Q9Y696 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
CLIC4Q9Y696 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC19.78■□□□□ 0.76
CLIC4Q9Y696 NKTR-203ENST00000442970 646 ntTSL 2 BASIC19.78■□□□□ 0.76
CLIC4Q9Y696 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC19.78■□□□□ 0.76
CLIC4Q9Y696 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CLIC4Q9Y696 AC074051.2-201ENST00000565115 352 ntBASIC19.78■□□□□ 0.76
CLIC4Q9Y696 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC19.78■□□□□ 0.76
CLIC4Q9Y696 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC19.78■□□□□ 0.76
CLIC4Q9Y696 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CLIC4Q9Y696 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CLIC4Q9Y696 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CLIC4Q9Y696 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC19.78■□□□□ 0.76
CLIC4Q9Y696 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
CLIC4Q9Y696 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
CLIC4Q9Y696 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
CLIC4Q9Y696 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CLIC4Q9Y696 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC19.78■□□□□ 0.76
CLIC4Q9Y696 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC19.78■□□□□ 0.76
CLIC4Q9Y696 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CLIC4Q9Y696 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC19.78■□□□□ 0.76
CLIC4Q9Y696 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CLIC4Q9Y696 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CLIC4Q9Y696 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CLIC4Q9Y696 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CLIC4Q9Y696 PCDHA14-201ENST00000506751 2298 ntBASIC19.77■□□□□ 0.76
CLIC4Q9Y696 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC19.77■□□□□ 0.76
CLIC4Q9Y696 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
CLIC4Q9Y696 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CLIC4Q9Y696 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC19.77■□□□□ 0.76
CLIC4Q9Y696 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CLIC4Q9Y696 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CLIC4Q9Y696 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CLIC4Q9Y696 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC19.77■□□□□ 0.76
CLIC4Q9Y696 KLF4P1-201ENST00000412782 1185 ntBASIC19.77■□□□□ 0.76
CLIC4Q9Y696 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC19.77■□□□□ 0.76
CLIC4Q9Y696 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC19.77■□□□□ 0.76
CLIC4Q9Y696 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CLIC4Q9Y696 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC19.77■□□□□ 0.76
CLIC4Q9Y696 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CLIC4Q9Y696 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
CLIC4Q9Y696 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC19.77■□□□□ 0.76
CLIC4Q9Y696 BCL10-202ENST00000620248 774 ntTSL 5 BASIC19.77■□□□□ 0.76
CLIC4Q9Y696 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC19.77■□□□□ 0.76
CLIC4Q9Y696 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC19.77■□□□□ 0.76
CLIC4Q9Y696 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC19.77■□□□□ 0.76
CLIC4Q9Y696 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC19.77■□□□□ 0.76
CLIC4Q9Y696 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CLIC4Q9Y696 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
CLIC4Q9Y696 STX3-203ENST00000529177 1571 ntTSL 2 BASIC19.77■□□□□ 0.76
CLIC4Q9Y696 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC19.77■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 58.4 ms