Protein–RNA interactions for Protein: Q9Y5P4

COL4A3BP, Collagen type IV alpha-3-binding protein, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BPQ9Y5P4 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC19.42■□□□□ 0.7
COL4A3BPQ9Y5P4 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC19.42■□□□□ 0.7
COL4A3BPQ9Y5P4 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC19.42■□□□□ 0.7
COL4A3BPQ9Y5P4 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
COL4A3BPQ9Y5P4 AC120114.3-201ENST00000611923 658 ntBASIC19.42■□□□□ 0.7
COL4A3BPQ9Y5P4 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
COL4A3BPQ9Y5P4 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
COL4A3BPQ9Y5P4 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
COL4A3BPQ9Y5P4 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
COL4A3BPQ9Y5P4 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
COL4A3BPQ9Y5P4 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
COL4A3BPQ9Y5P4 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC19.42■□□□□ 0.7
COL4A3BPQ9Y5P4 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC19.42■□□□□ 0.7
COL4A3BPQ9Y5P4 SIGLEC16-201ENST00000599858 1437 ntBASIC19.42■□□□□ 0.7
COL4A3BPQ9Y5P4 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
COL4A3BPQ9Y5P4 AC132938.5-201ENST00000624980 1813 ntBASIC19.41■□□□□ 0.7
COL4A3BPQ9Y5P4 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC19.41■□□□□ 0.7
COL4A3BPQ9Y5P4 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
COL4A3BPQ9Y5P4 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
COL4A3BPQ9Y5P4 CROCCP2-202ENST00000412962 2773 ntBASIC19.41■□□□□ 0.7
COL4A3BPQ9Y5P4 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
COL4A3BPQ9Y5P4 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC19.41■□□□□ 0.7
COL4A3BPQ9Y5P4 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
COL4A3BPQ9Y5P4 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
COL4A3BPQ9Y5P4 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
COL4A3BPQ9Y5P4 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
COL4A3BPQ9Y5P4 RPS2P28-201ENST00000314255 741 ntBASIC19.41■□□□□ 0.7
COL4A3BPQ9Y5P4 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
COL4A3BPQ9Y5P4 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
COL4A3BPQ9Y5P4 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
COL4A3BPQ9Y5P4 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC19.41■□□□□ 0.7
COL4A3BPQ9Y5P4 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC19.41■□□□□ 0.7
COL4A3BPQ9Y5P4 STK25P1-201ENST00000585406 838 ntBASIC19.41■□□□□ 0.7
COL4A3BPQ9Y5P4 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC19.41■□□□□ 0.7
COL4A3BPQ9Y5P4 PRKN-208ENST00000610470 531 ntTSL 2 BASIC19.41■□□□□ 0.7
COL4A3BPQ9Y5P4 PRKN-209ENST00000612485 225 ntTSL 5 BASIC19.41■□□□□ 0.7
COL4A3BPQ9Y5P4 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
COL4A3BPQ9Y5P4 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
COL4A3BPQ9Y5P4 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
COL4A3BPQ9Y5P4 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
COL4A3BPQ9Y5P4 AC243591.1-201ENST00000452967 1364 ntBASIC19.41■□□□□ 0.7
COL4A3BPQ9Y5P4 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
COL4A3BPQ9Y5P4 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
COL4A3BPQ9Y5P4 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
COL4A3BPQ9Y5P4 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
COL4A3BPQ9Y5P4 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
COL4A3BPQ9Y5P4 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
COL4A3BPQ9Y5P4 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
COL4A3BPQ9Y5P4 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC19.4■□□□□ 0.7
COL4A3BPQ9Y5P4 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC19.4■□□□□ 0.7
COL4A3BPQ9Y5P4 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC19.4■□□□□ 0.7
COL4A3BPQ9Y5P4 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC19.4■□□□□ 0.7
COL4A3BPQ9Y5P4 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
COL4A3BPQ9Y5P4 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC19.4■□□□□ 0.7
COL4A3BPQ9Y5P4 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC19.4■□□□□ 0.7
COL4A3BPQ9Y5P4 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
COL4A3BPQ9Y5P4 TPR-209ENST00000613151 2478 ntTSL 5 BASIC19.4■□□□□ 0.7
COL4A3BPQ9Y5P4 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
COL4A3BPQ9Y5P4 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC19.4■□□□□ 0.7
COL4A3BPQ9Y5P4 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
COL4A3BPQ9Y5P4 MSRA-206ENST00000521209 814 ntTSL 3 BASIC19.4■□□□□ 0.7
COL4A3BPQ9Y5P4 OR7E14P-202ENST00000530490 1290 ntBASIC19.4■□□□□ 0.7
COL4A3BPQ9Y5P4 RNF151-202ENST00000569210 853 ntTSL 2 BASIC19.4■□□□□ 0.7
COL4A3BPQ9Y5P4 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC19.4■□□□□ 0.7
COL4A3BPQ9Y5P4 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC19.4■□□□□ 0.7
COL4A3BPQ9Y5P4 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC19.4■□□□□ 0.7
COL4A3BPQ9Y5P4 AL022326.1-202ENST00000641533 845 ntBASIC19.4■□□□□ 0.7
COL4A3BPQ9Y5P4 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
COL4A3BPQ9Y5P4 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
COL4A3BPQ9Y5P4 IL9RP2-201ENST00000423948 1312 ntBASIC19.4■□□□□ 0.7
COL4A3BPQ9Y5P4 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
COL4A3BPQ9Y5P4 AC004817.3-201ENST00000602957 2129 ntBASIC19.4■□□□□ 0.7
COL4A3BPQ9Y5P4 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC19.4■□□□□ 0.7
COL4A3BPQ9Y5P4 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
COL4A3BPQ9Y5P4 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
COL4A3BPQ9Y5P4 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC19.4■□□□□ 0.7
COL4A3BPQ9Y5P4 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC19.4■□□□□ 0.7
COL4A3BPQ9Y5P4 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
COL4A3BPQ9Y5P4 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
COL4A3BPQ9Y5P4 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
COL4A3BPQ9Y5P4 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC19.39■□□□□ 0.7
COL4A3BPQ9Y5P4 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC19.39■□□□□ 0.69
COL4A3BPQ9Y5P4 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
COL4A3BPQ9Y5P4 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC19.39■□□□□ 0.69
COL4A3BPQ9Y5P4 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
COL4A3BPQ9Y5P4 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
COL4A3BPQ9Y5P4 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC19.39■□□□□ 0.69
COL4A3BPQ9Y5P4 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC19.39■□□□□ 0.69
COL4A3BPQ9Y5P4 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
COL4A3BPQ9Y5P4 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC19.39■□□□□ 0.69
COL4A3BPQ9Y5P4 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC19.39■□□□□ 0.69
COL4A3BPQ9Y5P4 AC139887.3-201ENST00000568585 713 ntBASIC19.39■□□□□ 0.69
COL4A3BPQ9Y5P4 LITAF-211ENST00000572255 516 ntTSL 4 BASIC19.39■□□□□ 0.69
COL4A3BPQ9Y5P4 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC19.39■□□□□ 0.69
COL4A3BPQ9Y5P4 TK1-204ENST00000590430 683 ntTSL 3 BASIC19.39■□□□□ 0.69
COL4A3BPQ9Y5P4 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
COL4A3BPQ9Y5P4 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC19.39■□□□□ 0.69
COL4A3BPQ9Y5P4 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC19.39■□□□□ 0.69
COL4A3BPQ9Y5P4 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
COL4A3BPQ9Y5P4 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms