Protein–RNA interactions for Protein: Q9XRX5

HHLA3, HERV-H LTR-associating protein 3, humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HHLA3Q9XRX5 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
HHLA3Q9XRX5 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC12.75□□□□□ -0.37
HHLA3Q9XRX5 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC12.75□□□□□ -0.37
HHLA3Q9XRX5 AP003733.1-201ENST00000491725 852 ntBASIC12.75□□□□□ -0.37
HHLA3Q9XRX5 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
HHLA3Q9XRX5 AC022616.7-201ENST00000525383 220 ntBASIC12.75□□□□□ -0.37
HHLA3Q9XRX5 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC12.75□□□□□ -0.37
HHLA3Q9XRX5 LTBR-211ENST00000543190 785 ntTSL 3 BASIC12.75□□□□□ -0.37
HHLA3Q9XRX5 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
HHLA3Q9XRX5 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC12.75□□□□□ -0.37
HHLA3Q9XRX5 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC12.75□□□□□ -0.37
HHLA3Q9XRX5 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC12.75□□□□□ -0.37
HHLA3Q9XRX5 AL049597.2-201ENST00000565575 961 ntBASIC12.75□□□□□ -0.37
HHLA3Q9XRX5 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
HHLA3Q9XRX5 AL603756.1-201ENST00000606511 2163 ntBASIC12.75□□□□□ -0.37
HHLA3Q9XRX5 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC12.75□□□□□ -0.37
HHLA3Q9XRX5 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC12.75□□□□□ -0.37
HHLA3Q9XRX5 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
HHLA3Q9XRX5 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC12.75□□□□□ -0.37
HHLA3Q9XRX5 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC12.75□□□□□ -0.37
HHLA3Q9XRX5 AC068418.2-201ENST00000577309 3703 ntBASIC12.75□□□□□ -0.37
HHLA3Q9XRX5 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
HHLA3Q9XRX5 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
HHLA3Q9XRX5 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC12.75□□□□□ -0.37
HHLA3Q9XRX5 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
HHLA3Q9XRX5 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
HHLA3Q9XRX5 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
HHLA3Q9XRX5 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
HHLA3Q9XRX5 AC026691.1-201ENST00000602502 2017 ntBASIC12.74□□□□□ -0.37
HHLA3Q9XRX5 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
HHLA3Q9XRX5 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC12.74□□□□□ -0.37
HHLA3Q9XRX5 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
HHLA3Q9XRX5 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
HHLA3Q9XRX5 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
HHLA3Q9XRX5 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
HHLA3Q9XRX5 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
HHLA3Q9XRX5 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
HHLA3Q9XRX5 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
HHLA3Q9XRX5 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
HHLA3Q9XRX5 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC12.74□□□□□ -0.37
HHLA3Q9XRX5 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
HHLA3Q9XRX5 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
HHLA3Q9XRX5 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
HHLA3Q9XRX5 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
HHLA3Q9XRX5 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC12.74□□□□□ -0.37
HHLA3Q9XRX5 HBZP1-201ENST00000354915 429 ntBASIC12.74□□□□□ -0.37
HHLA3Q9XRX5 HES2-202ENST00000377836 507 ntTSL 2 BASIC12.74□□□□□ -0.37
HHLA3Q9XRX5 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC12.74□□□□□ -0.37
HHLA3Q9XRX5 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC12.74□□□□□ -0.37
HHLA3Q9XRX5 KRT18P38-201ENST00000449496 1282 ntBASIC12.74□□□□□ -0.37
HHLA3Q9XRX5 LY6E-213ENST00000522528 606 ntTSL 3 BASIC12.74□□□□□ -0.37
HHLA3Q9XRX5 PPOX-214ENST00000535223 664 ntTSL 3 BASIC12.74□□□□□ -0.37
HHLA3Q9XRX5 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC12.74□□□□□ -0.37
HHLA3Q9XRX5 LITAF-220ENST00000620789 692 ntTSL 5 BASIC12.74□□□□□ -0.37
HHLA3Q9XRX5 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
HHLA3Q9XRX5 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC12.74□□□□□ -0.37
HHLA3Q9XRX5 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC12.74□□□□□ -0.37
HHLA3Q9XRX5 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
HHLA3Q9XRX5 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
HHLA3Q9XRX5 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC12.74□□□□□ -0.37
HHLA3Q9XRX5 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
HHLA3Q9XRX5 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
HHLA3Q9XRX5 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC12.74□□□□□ -0.37
HHLA3Q9XRX5 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
HHLA3Q9XRX5 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
HHLA3Q9XRX5 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
HHLA3Q9XRX5 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
HHLA3Q9XRX5 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC12.74□□□□□ -0.37
HHLA3Q9XRX5 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC12.74□□□□□ -0.37
HHLA3Q9XRX5 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC12.74□□□□□ -0.37
HHLA3Q9XRX5 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
HHLA3Q9XRX5 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC12.73□□□□□ -0.37
HHLA3Q9XRX5 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
HHLA3Q9XRX5 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
HHLA3Q9XRX5 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
HHLA3Q9XRX5 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
HHLA3Q9XRX5 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
HHLA3Q9XRX5 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
HHLA3Q9XRX5 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
HHLA3Q9XRX5 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC12.73□□□□□ -0.37
HHLA3Q9XRX5 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC12.73□□□□□ -0.37
HHLA3Q9XRX5 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
HHLA3Q9XRX5 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC12.73□□□□□ -0.37
HHLA3Q9XRX5 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
HHLA3Q9XRX5 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
HHLA3Q9XRX5 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC12.73□□□□□ -0.37
HHLA3Q9XRX5 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC12.73□□□□□ -0.37
HHLA3Q9XRX5 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
HHLA3Q9XRX5 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
HHLA3Q9XRX5 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC12.73□□□□□ -0.37
HHLA3Q9XRX5 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC12.73□□□□□ -0.37
HHLA3Q9XRX5 MIR662-201ENST00000384847 95 ntBASIC12.73□□□□□ -0.37
HHLA3Q9XRX5 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC12.73□□□□□ -0.37
HHLA3Q9XRX5 FAM210CP-201ENST00000445714 574 ntBASIC12.73□□□□□ -0.37
HHLA3Q9XRX5 AL671277.2-201ENST00000458060 996 ntBASIC12.73□□□□□ -0.37
HHLA3Q9XRX5 DUTP2-201ENST00000519164 463 ntBASIC12.73□□□□□ -0.37
HHLA3Q9XRX5 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
HHLA3Q9XRX5 NAA38-203ENST00000575071 553 ntTSL 2 BASIC12.73□□□□□ -0.37
HHLA3Q9XRX5 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC12.73□□□□□ -0.37
HHLA3Q9XRX5 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC12.73□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms