Protein–RNA interactions for Protein: Q9UN74

PCDHA4, Protocadherin alpha-4, humanhuman

Predictions only

Length 947 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4Q9UN74 CYGB-205ENST00000590175 830 ntTSL 3 BASIC19.8■□□□□ 0.76
PCDHA4Q9UN74 AL139424.1-201ENST00000607572 797 ntBASIC19.8■□□□□ 0.76
PCDHA4Q9UN74 AC148477.8-201ENST00000624298 468 ntBASIC19.8■□□□□ 0.76
PCDHA4Q9UN74 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
PCDHA4Q9UN74 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
PCDHA4Q9UN74 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC19.8■□□□□ 0.76
PCDHA4Q9UN74 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC19.8■□□□□ 0.76
PCDHA4Q9UN74 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
PCDHA4Q9UN74 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
PCDHA4Q9UN74 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC19.8■□□□□ 0.76
PCDHA4Q9UN74 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
PCDHA4Q9UN74 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
PCDHA4Q9UN74 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC19.79■□□□□ 0.76
PCDHA4Q9UN74 LINC02012-201ENST00000608206 1725 ntBASIC19.79■□□□□ 0.76
PCDHA4Q9UN74 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
PCDHA4Q9UN74 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
PCDHA4Q9UN74 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
PCDHA4Q9UN74 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
PCDHA4Q9UN74 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
PCDHA4Q9UN74 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC19.79■□□□□ 0.76
PCDHA4Q9UN74 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
PCDHA4Q9UN74 MED22-202ENST00000371999 987 ntTSL 3 BASIC19.79■□□□□ 0.76
PCDHA4Q9UN74 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
PCDHA4Q9UN74 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC19.79■□□□□ 0.76
PCDHA4Q9UN74 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
PCDHA4Q9UN74 LAGE3P1-201ENST00000425356 484 ntBASIC19.79■□□□□ 0.76
PCDHA4Q9UN74 HNRNPDP1-201ENST00000439535 754 ntBASIC19.79■□□□□ 0.76
PCDHA4Q9UN74 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC19.79■□□□□ 0.76
PCDHA4Q9UN74 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC19.79■□□□□ 0.76
PCDHA4Q9UN74 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
PCDHA4Q9UN74 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC19.79■□□□□ 0.76
PCDHA4Q9UN74 AL121894.2-201ENST00000602977 491 ntBASIC19.79■□□□□ 0.76
PCDHA4Q9UN74 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC19.79■□□□□ 0.76
PCDHA4Q9UN74 AC004706.3-202ENST00000621574 984 ntBASIC19.79■□□□□ 0.76
PCDHA4Q9UN74 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC19.79■□□□□ 0.76
PCDHA4Q9UN74 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
PCDHA4Q9UN74 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC19.79■□□□□ 0.76
PCDHA4Q9UN74 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
PCDHA4Q9UN74 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC19.79■□□□□ 0.76
PCDHA4Q9UN74 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
PCDHA4Q9UN74 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
PCDHA4Q9UN74 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
PCDHA4Q9UN74 AP001094.4-201ENST00000579008 2176 ntBASIC19.78■□□□□ 0.76
PCDHA4Q9UN74 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
PCDHA4Q9UN74 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
PCDHA4Q9UN74 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
PCDHA4Q9UN74 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PCDHA4Q9UN74 MOK-208ENST00000519058 917 ntTSL 2 BASIC19.78■□□□□ 0.76
PCDHA4Q9UN74 OR7E14P-202ENST00000530490 1290 ntBASIC19.78■□□□□ 0.76
PCDHA4Q9UN74 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC19.78■□□□□ 0.76
PCDHA4Q9UN74 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
PCDHA4Q9UN74 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC19.78■□□□□ 0.76
PCDHA4Q9UN74 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
PCDHA4Q9UN74 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC19.78■□□□□ 0.76
PCDHA4Q9UN74 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
PCDHA4Q9UN74 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PCDHA4Q9UN74 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PCDHA4Q9UN74 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PCDHA4Q9UN74 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
PCDHA4Q9UN74 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
PCDHA4Q9UN74 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
PCDHA4Q9UN74 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
PCDHA4Q9UN74 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
PCDHA4Q9UN74 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
PCDHA4Q9UN74 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
PCDHA4Q9UN74 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
PCDHA4Q9UN74 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC19.77■□□□□ 0.76
PCDHA4Q9UN74 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
PCDHA4Q9UN74 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
PCDHA4Q9UN74 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC19.77■□□□□ 0.76
PCDHA4Q9UN74 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
PCDHA4Q9UN74 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC19.77■□□□□ 0.76
PCDHA4Q9UN74 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC19.77■□□□□ 0.76
PCDHA4Q9UN74 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC19.77■□□□□ 0.76
PCDHA4Q9UN74 PPIE-208ENST00000470213 927 ntTSL 3 BASIC19.77■□□□□ 0.76
PCDHA4Q9UN74 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC19.77■□□□□ 0.76
PCDHA4Q9UN74 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC19.77■□□□□ 0.76
PCDHA4Q9UN74 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC19.77■□□□□ 0.76
PCDHA4Q9UN74 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC19.77■□□□□ 0.76
PCDHA4Q9UN74 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC19.77■□□□□ 0.76
PCDHA4Q9UN74 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
PCDHA4Q9UN74 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC19.77■□□□□ 0.76
PCDHA4Q9UN74 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC19.77■□□□□ 0.76
PCDHA4Q9UN74 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
PCDHA4Q9UN74 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
PCDHA4Q9UN74 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
PCDHA4Q9UN74 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
PCDHA4Q9UN74 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.75
PCDHA4Q9UN74 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
PCDHA4Q9UN74 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
PCDHA4Q9UN74 AL590787.1-201ENST00000568856 1315 ntBASIC19.76■□□□□ 0.75
PCDHA4Q9UN74 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
PCDHA4Q9UN74 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC19.76■□□□□ 0.75
PCDHA4Q9UN74 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC19.76■□□□□ 0.75
PCDHA4Q9UN74 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC19.76■□□□□ 0.75
PCDHA4Q9UN74 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC19.76■□□□□ 0.75
PCDHA4Q9UN74 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PCDHA4Q9UN74 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PCDHA4Q9UN74 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PCDHA4Q9UN74 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC19.76■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms