Protein–RNA interactions for Protein: Q9UBC3

DNMT3B, DNA (cytosine-5)-methyltransferase 3B, humanhuman

Known RBP Predictions only

Length 853 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3BQ9UBC3 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
DNMT3BQ9UBC3 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
DNMT3BQ9UBC3 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC18.03■□□□□ 0.48
DNMT3BQ9UBC3 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
DNMT3BQ9UBC3 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
DNMT3BQ9UBC3 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
DNMT3BQ9UBC3 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
DNMT3BQ9UBC3 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
DNMT3BQ9UBC3 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC18.03■□□□□ 0.48
DNMT3BQ9UBC3 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
DNMT3BQ9UBC3 AL139400.1-201ENST00000366220 510 ntBASIC18.03■□□□□ 0.48
DNMT3BQ9UBC3 PNMT-202ENST00000394246 821 ntTSL 2 BASIC18.03■□□□□ 0.48
DNMT3BQ9UBC3 DDT-204ENST00000404092 805 ntTSL 3 BASIC18.03■□□□□ 0.48
DNMT3BQ9UBC3 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC18.03■□□□□ 0.48
DNMT3BQ9UBC3 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
DNMT3BQ9UBC3 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC18.03■□□□□ 0.48
DNMT3BQ9UBC3 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
DNMT3BQ9UBC3 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC18.03■□□□□ 0.48
DNMT3BQ9UBC3 ACTL9-202ENST00000612068 1252 ntBASIC18.03■□□□□ 0.48
DNMT3BQ9UBC3 AC093028.1-201ENST00000622998 982 ntBASIC18.03■□□□□ 0.48
DNMT3BQ9UBC3 ORC5-208ENST00000626700 344 ntTSL 3 BASIC18.03■□□□□ 0.48
DNMT3BQ9UBC3 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
DNMT3BQ9UBC3 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
DNMT3BQ9UBC3 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
DNMT3BQ9UBC3 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC18.03■□□□□ 0.48
DNMT3BQ9UBC3 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
DNMT3BQ9UBC3 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC18.03■□□□□ 0.48
DNMT3BQ9UBC3 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC18.03■□□□□ 0.48
DNMT3BQ9UBC3 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
DNMT3BQ9UBC3 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
DNMT3BQ9UBC3 AC092919.2-201ENST00000623631 1645 ntBASIC18.02■□□□□ 0.48
DNMT3BQ9UBC3 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
DNMT3BQ9UBC3 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
DNMT3BQ9UBC3 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
DNMT3BQ9UBC3 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
DNMT3BQ9UBC3 TSEN15P1-201ENST00000423257 515 ntBASIC18.02■□□□□ 0.48
DNMT3BQ9UBC3 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC18.02■□□□□ 0.48
DNMT3BQ9UBC3 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC18.02■□□□□ 0.48
DNMT3BQ9UBC3 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
DNMT3BQ9UBC3 AL513480.1-201ENST00000451731 511 ntBASIC18.02■□□□□ 0.48
DNMT3BQ9UBC3 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
DNMT3BQ9UBC3 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
DNMT3BQ9UBC3 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC18.02■□□□□ 0.48
DNMT3BQ9UBC3 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC18.02■□□□□ 0.48
DNMT3BQ9UBC3 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC18.02■□□□□ 0.48
DNMT3BQ9UBC3 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC18.02■□□□□ 0.48
DNMT3BQ9UBC3 AL513210.1-201ENST00000629608 234 ntBASIC18.02■□□□□ 0.48
DNMT3BQ9UBC3 AC105339.1-204ENST00000636249 355 ntBASIC18.02■□□□□ 0.48
DNMT3BQ9UBC3 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
DNMT3BQ9UBC3 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
DNMT3BQ9UBC3 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
DNMT3BQ9UBC3 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
DNMT3BQ9UBC3 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
DNMT3BQ9UBC3 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
DNMT3BQ9UBC3 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
DNMT3BQ9UBC3 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
DNMT3BQ9UBC3 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.47
DNMT3BQ9UBC3 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
DNMT3BQ9UBC3 NOC2LP1-202ENST00000452600 2235 ntBASIC18.02■□□□□ 0.47
DNMT3BQ9UBC3 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
DNMT3BQ9UBC3 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC18.01■□□□□ 0.47
DNMT3BQ9UBC3 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC18.01■□□□□ 0.47
DNMT3BQ9UBC3 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
DNMT3BQ9UBC3 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC18.01■□□□□ 0.47
DNMT3BQ9UBC3 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
DNMT3BQ9UBC3 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC18.01■□□□□ 0.47
DNMT3BQ9UBC3 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC18.01■□□□□ 0.47
DNMT3BQ9UBC3 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
DNMT3BQ9UBC3 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
DNMT3BQ9UBC3 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC18.01■□□□□ 0.47
DNMT3BQ9UBC3 AC006116.8-202ENST00000587620 1550 ntBASIC18.01■□□□□ 0.47
DNMT3BQ9UBC3 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
DNMT3BQ9UBC3 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC18.01■□□□□ 0.47
DNMT3BQ9UBC3 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
DNMT3BQ9UBC3 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
DNMT3BQ9UBC3 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
DNMT3BQ9UBC3 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
DNMT3BQ9UBC3 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC18.01■□□□□ 0.47
DNMT3BQ9UBC3 AC004461.1-201ENST00000412461 403 ntBASIC18.01■□□□□ 0.47
DNMT3BQ9UBC3 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
DNMT3BQ9UBC3 SLC25A6P2-201ENST00000497974 877 ntBASIC18.01■□□□□ 0.47
DNMT3BQ9UBC3 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
DNMT3BQ9UBC3 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC18.01■□□□□ 0.47
DNMT3BQ9UBC3 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC18.01■□□□□ 0.47
DNMT3BQ9UBC3 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC18.01■□□□□ 0.47
DNMT3BQ9UBC3 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC18.01■□□□□ 0.47
DNMT3BQ9UBC3 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC18.01■□□□□ 0.47
DNMT3BQ9UBC3 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
DNMT3BQ9UBC3 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
DNMT3BQ9UBC3 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
DNMT3BQ9UBC3 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC18.01■□□□□ 0.47
DNMT3BQ9UBC3 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC18.01■□□□□ 0.47
DNMT3BQ9UBC3 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
DNMT3BQ9UBC3 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC18.01■□□□□ 0.47
DNMT3BQ9UBC3 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
DNMT3BQ9UBC3 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC18.01■□□□□ 0.47
DNMT3BQ9UBC3 PCDHB18P-201ENST00000524813 2368 ntBASIC18.01■□□□□ 0.47
DNMT3BQ9UBC3 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
DNMT3BQ9UBC3 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
DNMT3BQ9UBC3 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC18■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms