Protein–RNA interactions for Protein: Q9NYX4

CALY, Neuron-specific vesicular protein calcyon, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALYQ9NYX4 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CALYQ9NYX4 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CALYQ9NYX4 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
CALYQ9NYX4 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
CALYQ9NYX4 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC14.37□□□□□ -0.11
CALYQ9NYX4 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CALYQ9NYX4 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
CALYQ9NYX4 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CALYQ9NYX4 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CALYQ9NYX4 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC14.37□□□□□ -0.11
CALYQ9NYX4 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CALYQ9NYX4 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CALYQ9NYX4 WAC-202ENST00000347934 2839 ntTSL 5 BASIC14.37□□□□□ -0.11
CALYQ9NYX4 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CALYQ9NYX4 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CALYQ9NYX4 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC14.37□□□□□ -0.11
CALYQ9NYX4 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CALYQ9NYX4 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC14.37□□□□□ -0.11
CALYQ9NYX4 SRP19-202ENST00000445150 833 ntTSL 2 BASIC14.37□□□□□ -0.11
CALYQ9NYX4 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC14.37□□□□□ -0.11
CALYQ9NYX4 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CALYQ9NYX4 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC14.37□□□□□ -0.11
CALYQ9NYX4 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CALYQ9NYX4 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CALYQ9NYX4 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC14.37□□□□□ -0.11
CALYQ9NYX4 CROCCP1-201ENST00000426910 5675 ntBASIC14.37□□□□□ -0.11
CALYQ9NYX4 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CALYQ9NYX4 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC14.37□□□□□ -0.11
CALYQ9NYX4 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC14.37□□□□□ -0.11
CALYQ9NYX4 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CALYQ9NYX4 AC093525.9-201ENST00000624961 1746 ntBASIC14.37□□□□□ -0.11
CALYQ9NYX4 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
CALYQ9NYX4 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC14.37□□□□□ -0.11
CALYQ9NYX4 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
CALYQ9NYX4 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC14.37□□□□□ -0.11
CALYQ9NYX4 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
CALYQ9NYX4 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CALYQ9NYX4 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CALYQ9NYX4 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC14.37□□□□□ -0.11
CALYQ9NYX4 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CALYQ9NYX4 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CALYQ9NYX4 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CALYQ9NYX4 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CALYQ9NYX4 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CALYQ9NYX4 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CALYQ9NYX4 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC14.36□□□□□ -0.11
CALYQ9NYX4 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
CALYQ9NYX4 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CALYQ9NYX4 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC14.36□□□□□ -0.11
CALYQ9NYX4 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CALYQ9NYX4 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC14.36□□□□□ -0.11
CALYQ9NYX4 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CALYQ9NYX4 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CALYQ9NYX4 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CALYQ9NYX4 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC14.36□□□□□ -0.11
CALYQ9NYX4 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC14.36□□□□□ -0.11
CALYQ9NYX4 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
CALYQ9NYX4 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CALYQ9NYX4 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
CALYQ9NYX4 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CALYQ9NYX4 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CALYQ9NYX4 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC14.36□□□□□ -0.11
CALYQ9NYX4 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC14.36□□□□□ -0.11
CALYQ9NYX4 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC14.36□□□□□ -0.11
CALYQ9NYX4 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC14.36□□□□□ -0.11
CALYQ9NYX4 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC14.36□□□□□ -0.11
CALYQ9NYX4 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC14.36□□□□□ -0.11
CALYQ9NYX4 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC14.36□□□□□ -0.11
CALYQ9NYX4 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CALYQ9NYX4 AC138894.3-201ENST00000603787 634 ntBASIC14.36□□□□□ -0.11
CALYQ9NYX4 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CALYQ9NYX4 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
CALYQ9NYX4 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CALYQ9NYX4 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
CALYQ9NYX4 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CALYQ9NYX4 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
CALYQ9NYX4 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CALYQ9NYX4 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CALYQ9NYX4 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
CALYQ9NYX4 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CALYQ9NYX4 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CALYQ9NYX4 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CALYQ9NYX4 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
CALYQ9NYX4 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
CALYQ9NYX4 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC14.36□□□□□ -0.11
CALYQ9NYX4 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CALYQ9NYX4 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CALYQ9NYX4 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CALYQ9NYX4 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC14.35□□□□□ -0.11
CALYQ9NYX4 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CALYQ9NYX4 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CALYQ9NYX4 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CALYQ9NYX4 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC14.35□□□□□ -0.11
CALYQ9NYX4 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC14.35□□□□□ -0.11
CALYQ9NYX4 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
CALYQ9NYX4 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CALYQ9NYX4 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
CALYQ9NYX4 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
CALYQ9NYX4 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CALYQ9NYX4 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms