Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 FRMD8P1-201ENST00000440433 1524 ntBASIC19.25■□□□□ 0.67
BLOC1S4Q9NUP1 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
BLOC1S4Q9NUP1 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
BLOC1S4Q9NUP1 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
BLOC1S4Q9NUP1 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC19.25■□□□□ 0.67
BLOC1S4Q9NUP1 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC19.25■□□□□ 0.67
BLOC1S4Q9NUP1 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
BLOC1S4Q9NUP1 STX3-203ENST00000529177 1571 ntTSL 2 BASIC19.25■□□□□ 0.67
BLOC1S4Q9NUP1 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC19.25■□□□□ 0.67
BLOC1S4Q9NUP1 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC19.25■□□□□ 0.67
BLOC1S4Q9NUP1 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
BLOC1S4Q9NUP1 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
BLOC1S4Q9NUP1 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC19.25■□□□□ 0.67
BLOC1S4Q9NUP1 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC19.25■□□□□ 0.67
BLOC1S4Q9NUP1 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC19.25■□□□□ 0.67
BLOC1S4Q9NUP1 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC19.25■□□□□ 0.67
BLOC1S4Q9NUP1 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC19.25■□□□□ 0.67
BLOC1S4Q9NUP1 LINC01711-201ENST00000598340 967 ntBASIC19.25■□□□□ 0.67
BLOC1S4Q9NUP1 MTDHP4-201ENST00000600287 670 ntBASIC19.25■□□□□ 0.67
BLOC1S4Q9NUP1 IRF5-214ENST00000613821 595 ntTSL 5 BASIC19.25■□□□□ 0.67
BLOC1S4Q9NUP1 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
BLOC1S4Q9NUP1 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
BLOC1S4Q9NUP1 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
BLOC1S4Q9NUP1 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
BLOC1S4Q9NUP1 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
BLOC1S4Q9NUP1 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC19.25■□□□□ 0.67
BLOC1S4Q9NUP1 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC19.25■□□□□ 0.67
BLOC1S4Q9NUP1 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
BLOC1S4Q9NUP1 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC19.25■□□□□ 0.67
BLOC1S4Q9NUP1 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
BLOC1S4Q9NUP1 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
BLOC1S4Q9NUP1 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC19.25■□□□□ 0.67
BLOC1S4Q9NUP1 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
BLOC1S4Q9NUP1 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
BLOC1S4Q9NUP1 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
BLOC1S4Q9NUP1 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
BLOC1S4Q9NUP1 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC19.24■□□□□ 0.67
BLOC1S4Q9NUP1 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
BLOC1S4Q9NUP1 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
BLOC1S4Q9NUP1 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC19.24■□□□□ 0.67
BLOC1S4Q9NUP1 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
BLOC1S4Q9NUP1 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
BLOC1S4Q9NUP1 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
BLOC1S4Q9NUP1 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC19.24■□□□□ 0.67
BLOC1S4Q9NUP1 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
BLOC1S4Q9NUP1 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
BLOC1S4Q9NUP1 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
BLOC1S4Q9NUP1 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
BLOC1S4Q9NUP1 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC19.24■□□□□ 0.67
BLOC1S4Q9NUP1 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
BLOC1S4Q9NUP1 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC19.24■□□□□ 0.67
BLOC1S4Q9NUP1 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC19.24■□□□□ 0.67
BLOC1S4Q9NUP1 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC19.24■□□□□ 0.67
BLOC1S4Q9NUP1 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC19.24■□□□□ 0.67
BLOC1S4Q9NUP1 RNF151-202ENST00000569210 853 ntTSL 2 BASIC19.24■□□□□ 0.67
BLOC1S4Q9NUP1 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC19.24■□□□□ 0.67
BLOC1S4Q9NUP1 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
BLOC1S4Q9NUP1 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
BLOC1S4Q9NUP1 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC19.24■□□□□ 0.67
BLOC1S4Q9NUP1 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
BLOC1S4Q9NUP1 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
BLOC1S4Q9NUP1 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
BLOC1S4Q9NUP1 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
BLOC1S4Q9NUP1 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
BLOC1S4Q9NUP1 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
BLOC1S4Q9NUP1 AL590787.1-201ENST00000568856 1315 ntBASIC19.24■□□□□ 0.67
BLOC1S4Q9NUP1 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
BLOC1S4Q9NUP1 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC19.23■□□□□ 0.67
BLOC1S4Q9NUP1 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC19.23■□□□□ 0.67
BLOC1S4Q9NUP1 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC19.23■□□□□ 0.67
BLOC1S4Q9NUP1 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
BLOC1S4Q9NUP1 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC19.23■□□□□ 0.67
BLOC1S4Q9NUP1 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
BLOC1S4Q9NUP1 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
BLOC1S4Q9NUP1 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
BLOC1S4Q9NUP1 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
BLOC1S4Q9NUP1 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
BLOC1S4Q9NUP1 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
BLOC1S4Q9NUP1 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
BLOC1S4Q9NUP1 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
BLOC1S4Q9NUP1 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
BLOC1S4Q9NUP1 AL450487.1-201ENST00000426799 995 ntBASIC19.23■□□□□ 0.67
BLOC1S4Q9NUP1 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC19.23■□□□□ 0.67
BLOC1S4Q9NUP1 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
BLOC1S4Q9NUP1 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC19.23■□□□□ 0.67
BLOC1S4Q9NUP1 AC124947.2-201ENST00000547118 1133 ntBASIC19.23■□□□□ 0.67
BLOC1S4Q9NUP1 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC19.23■□□□□ 0.67
BLOC1S4Q9NUP1 RN7SL510P-201ENST00000581311 263 ntBASIC19.23■□□□□ 0.67
BLOC1S4Q9NUP1 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC19.23■□□□□ 0.67
BLOC1S4Q9NUP1 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
BLOC1S4Q9NUP1 AC092068.3-201ENST00000587894 2016 ntBASIC19.23■□□□□ 0.67
BLOC1S4Q9NUP1 AD000864.1-201ENST00000624076 2295 ntBASIC19.23■□□□□ 0.67
BLOC1S4Q9NUP1 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
BLOC1S4Q9NUP1 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
BLOC1S4Q9NUP1 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC19.23■□□□□ 0.67
BLOC1S4Q9NUP1 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
BLOC1S4Q9NUP1 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
BLOC1S4Q9NUP1 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
BLOC1S4Q9NUP1 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC19.22■□□□□ 0.67
BLOC1S4Q9NUP1 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms