Protein–RNA interactions for Protein: Q9NQS3

NECTIN3, Nectin-3, humanhuman

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN3Q9NQS3 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
NECTIN3Q9NQS3 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
NECTIN3Q9NQS3 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
NECTIN3Q9NQS3 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
NECTIN3Q9NQS3 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
NECTIN3Q9NQS3 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
NECTIN3Q9NQS3 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
NECTIN3Q9NQS3 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC16.68■□□□□ 0.26
NECTIN3Q9NQS3 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC16.68■□□□□ 0.26
NECTIN3Q9NQS3 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
NECTIN3Q9NQS3 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC16.68■□□□□ 0.26
NECTIN3Q9NQS3 CROCCP1-201ENST00000426910 5675 ntBASIC16.68■□□□□ 0.26
NECTIN3Q9NQS3 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC16.68■□□□□ 0.26
NECTIN3Q9NQS3 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC16.68■□□□□ 0.26
NECTIN3Q9NQS3 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
NECTIN3Q9NQS3 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
NECTIN3Q9NQS3 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
NECTIN3Q9NQS3 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
NECTIN3Q9NQS3 AL450487.1-201ENST00000426799 995 ntBASIC16.68■□□□□ 0.26
NECTIN3Q9NQS3 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC16.68■□□□□ 0.26
NECTIN3Q9NQS3 AC091304.2-201ENST00000564639 760 ntBASIC16.68■□□□□ 0.26
NECTIN3Q9NQS3 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC16.68■□□□□ 0.26
NECTIN3Q9NQS3 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC16.68■□□□□ 0.26
NECTIN3Q9NQS3 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC16.68■□□□□ 0.26
NECTIN3Q9NQS3 AC011467.2-201ENST00000598425 242 ntBASIC16.68■□□□□ 0.26
NECTIN3Q9NQS3 AC114341.1-201ENST00000618070 349 ntBASIC16.68■□□□□ 0.26
NECTIN3Q9NQS3 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
NECTIN3Q9NQS3 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
NECTIN3Q9NQS3 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
NECTIN3Q9NQS3 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
NECTIN3Q9NQS3 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
NECTIN3Q9NQS3 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
NECTIN3Q9NQS3 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC16.68■□□□□ 0.26
NECTIN3Q9NQS3 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
NECTIN3Q9NQS3 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
NECTIN3Q9NQS3 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC16.68■□□□□ 0.26
NECTIN3Q9NQS3 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
NECTIN3Q9NQS3 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
NECTIN3Q9NQS3 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
NECTIN3Q9NQS3 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
NECTIN3Q9NQS3 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC16.67■□□□□ 0.26
NECTIN3Q9NQS3 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
NECTIN3Q9NQS3 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC16.67■□□□□ 0.26
NECTIN3Q9NQS3 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC16.67■□□□□ 0.26
NECTIN3Q9NQS3 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
NECTIN3Q9NQS3 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC16.67■□□□□ 0.26
NECTIN3Q9NQS3 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
NECTIN3Q9NQS3 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
NECTIN3Q9NQS3 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC16.67■□□□□ 0.26
NECTIN3Q9NQS3 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
NECTIN3Q9NQS3 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
NECTIN3Q9NQS3 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
NECTIN3Q9NQS3 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
NECTIN3Q9NQS3 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
NECTIN3Q9NQS3 KRT16P4-201ENST00000453883 522 ntBASIC16.67■□□□□ 0.26
NECTIN3Q9NQS3 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC16.67■□□□□ 0.26
NECTIN3Q9NQS3 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC16.67■□□□□ 0.26
NECTIN3Q9NQS3 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
NECTIN3Q9NQS3 MIR5100-201ENST00000579544 119 ntBASIC16.67■□□□□ 0.26
NECTIN3Q9NQS3 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC16.67■□□□□ 0.26
NECTIN3Q9NQS3 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
NECTIN3Q9NQS3 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
NECTIN3Q9NQS3 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC16.67■□□□□ 0.26
NECTIN3Q9NQS3 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
NECTIN3Q9NQS3 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
NECTIN3Q9NQS3 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
NECTIN3Q9NQS3 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC16.67■□□□□ 0.26
NECTIN3Q9NQS3 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC16.67■□□□□ 0.26
NECTIN3Q9NQS3 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
NECTIN3Q9NQS3 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
NECTIN3Q9NQS3 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
NECTIN3Q9NQS3 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
NECTIN3Q9NQS3 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
NECTIN3Q9NQS3 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC16.66■□□□□ 0.26
NECTIN3Q9NQS3 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC16.66■□□□□ 0.26
NECTIN3Q9NQS3 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
NECTIN3Q9NQS3 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC16.66■□□□□ 0.26
NECTIN3Q9NQS3 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
NECTIN3Q9NQS3 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC16.66■□□□□ 0.26
NECTIN3Q9NQS3 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC16.66■□□□□ 0.26
NECTIN3Q9NQS3 DANCR-204ENST00000444958 709 ntTSL 3 BASIC16.66■□□□□ 0.26
NECTIN3Q9NQS3 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
NECTIN3Q9NQS3 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC16.66■□□□□ 0.26
NECTIN3Q9NQS3 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
NECTIN3Q9NQS3 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
NECTIN3Q9NQS3 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC16.66■□□□□ 0.26
NECTIN3Q9NQS3 IGHV3OR16-7-201ENST00000604106 360 ntBASIC16.66■□□□□ 0.26
NECTIN3Q9NQS3 AL591684.3-201ENST00000605187 298 ntBASIC16.66■□□□□ 0.26
NECTIN3Q9NQS3 AC116407.2-201ENST00000613639 860 ntBASIC16.66■□□□□ 0.26
NECTIN3Q9NQS3 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
NECTIN3Q9NQS3 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
NECTIN3Q9NQS3 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
NECTIN3Q9NQS3 INTS4P1-201ENST00000438455 1935 ntBASIC16.66■□□□□ 0.26
NECTIN3Q9NQS3 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC16.66■□□□□ 0.26
NECTIN3Q9NQS3 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
NECTIN3Q9NQS3 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC16.66■□□□□ 0.26
NECTIN3Q9NQS3 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
NECTIN3Q9NQS3 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
NECTIN3Q9NQS3 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
NECTIN3Q9NQS3 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms