Protein–RNA interactions for Protein: Q9H788

SH2D4A, SH2 domain-containing protein 4A, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D4AQ9H788 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
SH2D4AQ9H788 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SH2D4AQ9H788 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC20.18■□□□□ 0.82
SH2D4AQ9H788 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC20.18■□□□□ 0.82
SH2D4AQ9H788 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
SH2D4AQ9H788 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
SH2D4AQ9H788 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC20.18■□□□□ 0.82
SH2D4AQ9H788 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SH2D4AQ9H788 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
SH2D4AQ9H788 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SH2D4AQ9H788 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
SH2D4AQ9H788 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC20.18■□□□□ 0.82
SH2D4AQ9H788 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SH2D4AQ9H788 SLC25A6P5-201ENST00000435663 894 ntBASIC20.18■□□□□ 0.82
SH2D4AQ9H788 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC20.18■□□□□ 0.82
SH2D4AQ9H788 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC20.18■□□□□ 0.82
SH2D4AQ9H788 TK1-204ENST00000590430 683 ntTSL 3 BASIC20.18■□□□□ 0.82
SH2D4AQ9H788 AP001160.2-201ENST00000596071 487 ntBASIC20.18■□□□□ 0.82
SH2D4AQ9H788 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC20.18■□□□□ 0.82
SH2D4AQ9H788 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC20.18■□□□□ 0.82
SH2D4AQ9H788 AC010507.1-201ENST00000633895 436 ntBASIC20.18■□□□□ 0.82
SH2D4AQ9H788 AC134684.3-201ENST00000641758 218 ntBASIC20.18■□□□□ 0.82
SH2D4AQ9H788 AC092865.6-201ENST00000642101 219 ntBASIC20.18■□□□□ 0.82
SH2D4AQ9H788 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC20.18■□□□□ 0.82
SH2D4AQ9H788 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC20.18■□□□□ 0.82
SH2D4AQ9H788 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC20.18■□□□□ 0.82
SH2D4AQ9H788 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SH2D4AQ9H788 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SH2D4AQ9H788 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
SH2D4AQ9H788 CD276-201ENST00000318424 2738 ntTSL 5 BASIC20.18■□□□□ 0.82
SH2D4AQ9H788 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC20.17■□□□□ 0.82
SH2D4AQ9H788 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
SH2D4AQ9H788 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SH2D4AQ9H788 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC20.17■□□□□ 0.82
SH2D4AQ9H788 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC20.17■□□□□ 0.82
SH2D4AQ9H788 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
SH2D4AQ9H788 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC20.17■□□□□ 0.82
SH2D4AQ9H788 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SH2D4AQ9H788 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
SH2D4AQ9H788 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
SH2D4AQ9H788 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SH2D4AQ9H788 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
SH2D4AQ9H788 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
SH2D4AQ9H788 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
SH2D4AQ9H788 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC20.17■□□□□ 0.82
SH2D4AQ9H788 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC20.17■□□□□ 0.82
SH2D4AQ9H788 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC20.17■□□□□ 0.82
SH2D4AQ9H788 AC211486.1-202ENST00000416371 468 ntBASIC20.17■□□□□ 0.82
SH2D4AQ9H788 AC211476.1-201ENST00000503899 468 ntBASIC20.17■□□□□ 0.82
SH2D4AQ9H788 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC20.17■□□□□ 0.82
SH2D4AQ9H788 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC20.17■□□□□ 0.82
SH2D4AQ9H788 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC20.17■□□□□ 0.82
SH2D4AQ9H788 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SH2D4AQ9H788 C20orf181-201ENST00000623918 480 ntBASIC20.17■□□□□ 0.82
SH2D4AQ9H788 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC20.17■□□□□ 0.82
SH2D4AQ9H788 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
SH2D4AQ9H788 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
SH2D4AQ9H788 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC20.17■□□□□ 0.82
SH2D4AQ9H788 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
SH2D4AQ9H788 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC20.17■□□□□ 0.82
SH2D4AQ9H788 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SH2D4AQ9H788 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC20.17■□□□□ 0.82
SH2D4AQ9H788 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
SH2D4AQ9H788 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC20.17■□□□□ 0.82
SH2D4AQ9H788 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
SH2D4AQ9H788 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SH2D4AQ9H788 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SH2D4AQ9H788 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC20.16■□□□□ 0.82
SH2D4AQ9H788 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
SH2D4AQ9H788 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SH2D4AQ9H788 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC20.16■□□□□ 0.82
SH2D4AQ9H788 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC20.16■□□□□ 0.82
SH2D4AQ9H788 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC20.16■□□□□ 0.82
SH2D4AQ9H788 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
SH2D4AQ9H788 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
SH2D4AQ9H788 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC20.16■□□□□ 0.82
SH2D4AQ9H788 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
SH2D4AQ9H788 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC20.16■□□□□ 0.82
SH2D4AQ9H788 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
SH2D4AQ9H788 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SH2D4AQ9H788 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
SH2D4AQ9H788 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC20.16■□□□□ 0.82
SH2D4AQ9H788 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
SH2D4AQ9H788 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
SH2D4AQ9H788 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC20.16■□□□□ 0.82
SH2D4AQ9H788 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
SH2D4AQ9H788 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC20.16■□□□□ 0.82
SH2D4AQ9H788 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC20.16■□□□□ 0.82
SH2D4AQ9H788 URGCP-206ENST00000446958 365 ntTSL 2 BASIC20.16■□□□□ 0.82
SH2D4AQ9H788 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC20.16■□□□□ 0.82
SH2D4AQ9H788 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC20.16■□□□□ 0.82
SH2D4AQ9H788 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC20.16■□□□□ 0.82
SH2D4AQ9H788 POLD4-207ENST00000531239 584 ntTSL 2 BASIC20.16■□□□□ 0.82
SH2D4AQ9H788 PDPK2P-202ENST00000562415 1191 ntBASIC20.16■□□□□ 0.82
SH2D4AQ9H788 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC20.16■□□□□ 0.82
SH2D4AQ9H788 OR7E47P-204ENST00000575924 449 ntBASIC20.16■□□□□ 0.82
SH2D4AQ9H788 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC20.16■□□□□ 0.82
SH2D4AQ9H788 AL513190.1-201ENST00000621254 727 ntBASIC20.16■□□□□ 0.82
SH2D4AQ9H788 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC20.16■□□□□ 0.82
SH2D4AQ9H788 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 64 ms