Protein–RNA interactions for Protein: Q9BWW4

SSBP3, Single-stranded DNA-binding protein 3, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3Q9BWW4 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
SSBP3Q9BWW4 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
SSBP3Q9BWW4 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SSBP3Q9BWW4 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
SSBP3Q9BWW4 IL9RP2-201ENST00000423948 1312 ntBASIC14.51□□□□□ -0.09
SSBP3Q9BWW4 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
SSBP3Q9BWW4 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
SSBP3Q9BWW4 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC14.51□□□□□ -0.09
SSBP3Q9BWW4 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC14.51□□□□□ -0.09
SSBP3Q9BWW4 AC005104.2-201ENST00000427818 678 ntBASIC14.51□□□□□ -0.09
SSBP3Q9BWW4 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC14.51□□□□□ -0.09
SSBP3Q9BWW4 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC14.51□□□□□ -0.09
SSBP3Q9BWW4 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
SSBP3Q9BWW4 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC14.51□□□□□ -0.09
SSBP3Q9BWW4 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC14.51□□□□□ -0.09
SSBP3Q9BWW4 LITAF-211ENST00000572255 516 ntTSL 4 BASIC14.51□□□□□ -0.09
SSBP3Q9BWW4 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC14.51□□□□□ -0.09
SSBP3Q9BWW4 STK25P1-201ENST00000585406 838 ntBASIC14.51□□□□□ -0.09
SSBP3Q9BWW4 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
SSBP3Q9BWW4 AL049840.3-201ENST00000602669 611 ntBASIC14.51□□□□□ -0.09
SSBP3Q9BWW4 AC008735.5-201ENST00000623544 497 ntBASIC14.51□□□□□ -0.09
SSBP3Q9BWW4 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
SSBP3Q9BWW4 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SSBP3Q9BWW4 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
SSBP3Q9BWW4 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
SSBP3Q9BWW4 AC004817.3-201ENST00000602957 2129 ntBASIC14.51□□□□□ -0.09
SSBP3Q9BWW4 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
SSBP3Q9BWW4 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SSBP3Q9BWW4 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC14.51□□□□□ -0.09
SSBP3Q9BWW4 EML3-212ENST00000494176 2901 ntTSL 2 BASIC14.51□□□□□ -0.09
SSBP3Q9BWW4 EML3-216ENST00000529309 2909 ntTSL 2 BASIC14.51□□□□□ -0.09
SSBP3Q9BWW4 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
SSBP3Q9BWW4 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
SSBP3Q9BWW4 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
SSBP3Q9BWW4 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC14.5□□□□□ -0.09
SSBP3Q9BWW4 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
SSBP3Q9BWW4 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
SSBP3Q9BWW4 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC14.5□□□□□ -0.09
SSBP3Q9BWW4 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC14.5□□□□□ -0.09
SSBP3Q9BWW4 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC14.5□□□□□ -0.09
SSBP3Q9BWW4 AC243591.1-201ENST00000452967 1364 ntBASIC14.5□□□□□ -0.09
SSBP3Q9BWW4 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
SSBP3Q9BWW4 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
SSBP3Q9BWW4 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC14.5□□□□□ -0.09
SSBP3Q9BWW4 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
SSBP3Q9BWW4 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC14.5□□□□□ -0.09
SSBP3Q9BWW4 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
SSBP3Q9BWW4 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
SSBP3Q9BWW4 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
SSBP3Q9BWW4 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC14.5□□□□□ -0.09
SSBP3Q9BWW4 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC14.5□□□□□ -0.09
SSBP3Q9BWW4 TEX30-205ENST00000376029 959 ntTSL 2 BASIC14.5□□□□□ -0.09
SSBP3Q9BWW4 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
SSBP3Q9BWW4 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC14.5□□□□□ -0.09
SSBP3Q9BWW4 S100A2-206ENST00000497140 697 ntTSL 2 BASIC14.5□□□□□ -0.09
SSBP3Q9BWW4 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC14.5□□□□□ -0.09
SSBP3Q9BWW4 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC14.5□□□□□ -0.09
SSBP3Q9BWW4 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC14.5□□□□□ -0.09
SSBP3Q9BWW4 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC14.5□□□□□ -0.09
SSBP3Q9BWW4 AC006557.2-201ENST00000592985 1240 ntBASIC14.5□□□□□ -0.09
SSBP3Q9BWW4 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC14.5□□□□□ -0.09
SSBP3Q9BWW4 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC14.5□□□□□ -0.09
SSBP3Q9BWW4 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC14.5□□□□□ -0.09
SSBP3Q9BWW4 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
SSBP3Q9BWW4 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
SSBP3Q9BWW4 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
SSBP3Q9BWW4 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
SSBP3Q9BWW4 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
SSBP3Q9BWW4 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
SSBP3Q9BWW4 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC14.5□□□□□ -0.09
SSBP3Q9BWW4 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
SSBP3Q9BWW4 HARS-201ENST00000307633 1780 ntTSL 2 BASIC14.5□□□□□ -0.09
SSBP3Q9BWW4 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
SSBP3Q9BWW4 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
SSBP3Q9BWW4 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
SSBP3Q9BWW4 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC14.49□□□□□ -0.09
SSBP3Q9BWW4 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
SSBP3Q9BWW4 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC14.49□□□□□ -0.09
SSBP3Q9BWW4 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
SSBP3Q9BWW4 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
SSBP3Q9BWW4 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
SSBP3Q9BWW4 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
SSBP3Q9BWW4 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
SSBP3Q9BWW4 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
SSBP3Q9BWW4 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC14.49□□□□□ -0.09
SSBP3Q9BWW4 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
SSBP3Q9BWW4 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
SSBP3Q9BWW4 AC009336.1-201ENST00000608941 1553 ntBASIC14.49□□□□□ -0.09
SSBP3Q9BWW4 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
SSBP3Q9BWW4 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
SSBP3Q9BWW4 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
SSBP3Q9BWW4 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC14.49□□□□□ -0.09
SSBP3Q9BWW4 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC14.49□□□□□ -0.09
SSBP3Q9BWW4 SLC25A6P5-201ENST00000435663 894 ntBASIC14.49□□□□□ -0.09
SSBP3Q9BWW4 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC14.49□□□□□ -0.09
SSBP3Q9BWW4 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC14.49□□□□□ -0.09
SSBP3Q9BWW4 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC14.49□□□□□ -0.09
SSBP3Q9BWW4 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC14.49□□□□□ -0.09
SSBP3Q9BWW4 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC14.49□□□□□ -0.09
SSBP3Q9BWW4 AC105339.3-201ENST00000560043 636 ntBASIC14.49□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms