Protein–RNA interactions for Protein: Q9BUN5

CCDC28B, Coiled-coil domain-containing protein 28B, humanhuman

Predictions only

Length 200 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC28BQ9BUN5 TSPY20P-201ENST00000450910 630 ntBASIC16.91■□□□□ 0.3
CCDC28BQ9BUN5 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC16.91■□□□□ 0.3
CCDC28BQ9BUN5 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC16.91■□□□□ 0.3
CCDC28BQ9BUN5 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CCDC28BQ9BUN5 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CCDC28BQ9BUN5 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
CCDC28BQ9BUN5 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
CCDC28BQ9BUN5 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC16.91■□□□□ 0.3
CCDC28BQ9BUN5 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CCDC28BQ9BUN5 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
CCDC28BQ9BUN5 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CCDC28BQ9BUN5 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CCDC28BQ9BUN5 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC16.91■□□□□ 0.3
CCDC28BQ9BUN5 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC16.91■□□□□ 0.3
CCDC28BQ9BUN5 AC068418.2-201ENST00000577309 3703 ntBASIC16.91■□□□□ 0.3
CCDC28BQ9BUN5 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
CCDC28BQ9BUN5 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CCDC28BQ9BUN5 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC16.9■□□□□ 0.3
CCDC28BQ9BUN5 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC16.9■□□□□ 0.3
CCDC28BQ9BUN5 RNF216P1-203ENST00000404404 2427 ntBASIC16.9■□□□□ 0.3
CCDC28BQ9BUN5 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
CCDC28BQ9BUN5 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC16.9■□□□□ 0.3
CCDC28BQ9BUN5 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC16.9■□□□□ 0.3
CCDC28BQ9BUN5 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
CCDC28BQ9BUN5 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CCDC28BQ9BUN5 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CCDC28BQ9BUN5 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CCDC28BQ9BUN5 ADM-208ENST00000534464 1640 ntTSL 2 BASIC16.9■□□□□ 0.3
CCDC28BQ9BUN5 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CCDC28BQ9BUN5 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CCDC28BQ9BUN5 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
CCDC28BQ9BUN5 KRT18P48-201ENST00000434763 852 ntBASIC16.9■□□□□ 0.3
CCDC28BQ9BUN5 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC16.9■□□□□ 0.3
CCDC28BQ9BUN5 RPS20-210ENST00000523936 899 ntTSL 2 BASIC16.9■□□□□ 0.3
CCDC28BQ9BUN5 CD81-212ENST00000526072 1172 ntTSL 5 BASIC16.9■□□□□ 0.3
CCDC28BQ9BUN5 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CCDC28BQ9BUN5 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC16.9■□□□□ 0.3
CCDC28BQ9BUN5 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
CCDC28BQ9BUN5 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CCDC28BQ9BUN5 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
CCDC28BQ9BUN5 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CCDC28BQ9BUN5 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CCDC28BQ9BUN5 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC16.9■□□□□ 0.3
CCDC28BQ9BUN5 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CCDC28BQ9BUN5 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC16.9■□□□□ 0.3
CCDC28BQ9BUN5 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
CCDC28BQ9BUN5 AC105917.1-201ENST00000506637 2539 ntBASIC16.9■□□□□ 0.3
CCDC28BQ9BUN5 CYP2T1P-202ENST00000641596 2535 ntBASIC16.9■□□□□ 0.3
CCDC28BQ9BUN5 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CCDC28BQ9BUN5 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC16.9■□□□□ 0.3
CCDC28BQ9BUN5 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
CCDC28BQ9BUN5 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC16.89■□□□□ 0.3
CCDC28BQ9BUN5 AL391807.1-203ENST00000604392 2365 ntBASIC16.89■□□□□ 0.3
CCDC28BQ9BUN5 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC16.89■□□□□ 0.29
CCDC28BQ9BUN5 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CCDC28BQ9BUN5 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CCDC28BQ9BUN5 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
CCDC28BQ9BUN5 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
CCDC28BQ9BUN5 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC16.89■□□□□ 0.29
CCDC28BQ9BUN5 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC16.89■□□□□ 0.29
CCDC28BQ9BUN5 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
CCDC28BQ9BUN5 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
CCDC28BQ9BUN5 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC16.89■□□□□ 0.29
CCDC28BQ9BUN5 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC16.89■□□□□ 0.29
CCDC28BQ9BUN5 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CCDC28BQ9BUN5 CYP2D8P-201ENST00000433633 1490 ntBASIC16.89■□□□□ 0.29
CCDC28BQ9BUN5 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
CCDC28BQ9BUN5 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CCDC28BQ9BUN5 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC16.89■□□□□ 0.29
CCDC28BQ9BUN5 MYCLP1-201ENST00000372451 1075 ntBASIC16.89■□□□□ 0.29
CCDC28BQ9BUN5 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CCDC28BQ9BUN5 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
CCDC28BQ9BUN5 ECEL1P3-201ENST00000427961 737 ntBASIC16.89■□□□□ 0.29
CCDC28BQ9BUN5 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC16.89■□□□□ 0.29
CCDC28BQ9BUN5 CNP-204ENST00000472031 1019 ntTSL 2 BASIC16.89■□□□□ 0.29
CCDC28BQ9BUN5 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC16.89■□□□□ 0.29
CCDC28BQ9BUN5 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC16.89■□□□□ 0.29
CCDC28BQ9BUN5 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
CCDC28BQ9BUN5 USP36-216ENST00000589424 970 ntTSL 5 BASIC16.89■□□□□ 0.29
CCDC28BQ9BUN5 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
CCDC28BQ9BUN5 AL136038.4-201ENST00000603606 1261 ntBASIC16.89■□□□□ 0.29
CCDC28BQ9BUN5 SNX21-213ENST00000614929 587 ntTSL 5 BASIC16.89■□□□□ 0.29
CCDC28BQ9BUN5 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC16.89■□□□□ 0.29
CCDC28BQ9BUN5 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
CCDC28BQ9BUN5 AC010947.1-201ENST00000623454 693 ntBASIC16.89■□□□□ 0.29
CCDC28BQ9BUN5 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CCDC28BQ9BUN5 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC16.89■□□□□ 0.29
CCDC28BQ9BUN5 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC16.89■□□□□ 0.29
CCDC28BQ9BUN5 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
CCDC28BQ9BUN5 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
CCDC28BQ9BUN5 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC16.89■□□□□ 0.29
CCDC28BQ9BUN5 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC16.89■□□□□ 0.29
CCDC28BQ9BUN5 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CCDC28BQ9BUN5 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC16.89■□□□□ 0.29
CCDC28BQ9BUN5 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
CCDC28BQ9BUN5 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
CCDC28BQ9BUN5 AL513523.2-202ENST00000427283 2040 ntBASIC16.89■□□□□ 0.29
CCDC28BQ9BUN5 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
CCDC28BQ9BUN5 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC16.89■□□□□ 0.29
CCDC28BQ9BUN5 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms