Protein–RNA interactions for Protein: Q9BT23

LIMD2, LIM domain-containing protein 2, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2Q9BT23 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
LIMD2Q9BT23 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC10.39□□□□□ -0.75
LIMD2Q9BT23 STARP1-201ENST00000397973 869 ntBASIC10.39□□□□□ -0.75
LIMD2Q9BT23 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
LIMD2Q9BT23 KRT18P65-201ENST00000439811 1286 ntBASIC10.39□□□□□ -0.75
LIMD2Q9BT23 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC10.39□□□□□ -0.75
LIMD2Q9BT23 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC10.39□□□□□ -0.75
LIMD2Q9BT23 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
LIMD2Q9BT23 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC10.39□□□□□ -0.75
LIMD2Q9BT23 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC10.39□□□□□ -0.75
LIMD2Q9BT23 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC10.39□□□□□ -0.75
LIMD2Q9BT23 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC10.39□□□□□ -0.75
LIMD2Q9BT23 ZNF444P1-201ENST00000559497 298 ntBASIC10.39□□□□□ -0.75
LIMD2Q9BT23 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC10.39□□□□□ -0.75
LIMD2Q9BT23 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC10.39□□□□□ -0.75
LIMD2Q9BT23 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC10.39□□□□□ -0.75
LIMD2Q9BT23 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC10.39□□□□□ -0.75
LIMD2Q9BT23 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC10.39□□□□□ -0.75
LIMD2Q9BT23 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC10.39□□□□□ -0.75
LIMD2Q9BT23 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC10.39□□□□□ -0.75
LIMD2Q9BT23 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC10.39□□□□□ -0.75
LIMD2Q9BT23 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
LIMD2Q9BT23 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC10.39□□□□□ -0.75
LIMD2Q9BT23 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
LIMD2Q9BT23 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC10.39□□□□□ -0.75
LIMD2Q9BT23 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC10.39□□□□□ -0.75
LIMD2Q9BT23 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
LIMD2Q9BT23 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
LIMD2Q9BT23 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
LIMD2Q9BT23 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC10.39□□□□□ -0.75
LIMD2Q9BT23 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC10.39□□□□□ -0.75
LIMD2Q9BT23 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC10.39□□□□□ -0.75
LIMD2Q9BT23 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
LIMD2Q9BT23 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
LIMD2Q9BT23 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
LIMD2Q9BT23 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC10.39□□□□□ -0.75
LIMD2Q9BT23 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
LIMD2Q9BT23 GABRG3-208ENST00000615808 10768 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
LIMD2Q9BT23 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC10.39□□□□□ -0.75
LIMD2Q9BT23 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
LIMD2Q9BT23 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC10.39□□□□□ -0.75
LIMD2Q9BT23 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
LIMD2Q9BT23 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC10.39□□□□□ -0.75
LIMD2Q9BT23 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
LIMD2Q9BT23 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
LIMD2Q9BT23 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC10.38□□□□□ -0.75
LIMD2Q9BT23 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
LIMD2Q9BT23 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC10.38□□□□□ -0.75
LIMD2Q9BT23 CD276-203ENST00000537340 2439 ntTSL 2 BASIC10.38□□□□□ -0.75
LIMD2Q9BT23 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
LIMD2Q9BT23 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC10.38□□□□□ -0.75
LIMD2Q9BT23 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
LIMD2Q9BT23 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
LIMD2Q9BT23 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC10.38□□□□□ -0.75
LIMD2Q9BT23 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
LIMD2Q9BT23 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC10.38□□□□□ -0.75
LIMD2Q9BT23 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
LIMD2Q9BT23 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
LIMD2Q9BT23 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC10.38□□□□□ -0.75
LIMD2Q9BT23 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC10.38□□□□□ -0.75
LIMD2Q9BT23 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC10.38□□□□□ -0.75
LIMD2Q9BT23 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
LIMD2Q9BT23 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
LIMD2Q9BT23 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC10.38□□□□□ -0.75
LIMD2Q9BT23 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
LIMD2Q9BT23 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC10.38□□□□□ -0.75
LIMD2Q9BT23 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
LIMD2Q9BT23 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
LIMD2Q9BT23 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
LIMD2Q9BT23 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
LIMD2Q9BT23 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC10.38□□□□□ -0.75
LIMD2Q9BT23 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
LIMD2Q9BT23 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC10.38□□□□□ -0.75
LIMD2Q9BT23 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC10.38□□□□□ -0.75
LIMD2Q9BT23 PPOX-214ENST00000535223 664 ntTSL 3 BASIC10.38□□□□□ -0.75
LIMD2Q9BT23 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
LIMD2Q9BT23 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC10.38□□□□□ -0.75
LIMD2Q9BT23 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC10.38□□□□□ -0.75
LIMD2Q9BT23 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
LIMD2Q9BT23 GXYLT1P4-201ENST00000613576 1192 ntBASIC10.38□□□□□ -0.75
LIMD2Q9BT23 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC10.38□□□□□ -0.75
LIMD2Q9BT23 AC097493.4-201ENST00000641197 219 ntBASIC10.38□□□□□ -0.75
LIMD2Q9BT23 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC10.38□□□□□ -0.75
LIMD2Q9BT23 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC10.38□□□□□ -0.75
LIMD2Q9BT23 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC10.38□□□□□ -0.75
LIMD2Q9BT23 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
LIMD2Q9BT23 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC10.38□□□□□ -0.75
LIMD2Q9BT23 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
LIMD2Q9BT23 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC10.38□□□□□ -0.75
LIMD2Q9BT23 AC008764.6-201ENST00000595909 2069 ntBASIC10.38□□□□□ -0.75
LIMD2Q9BT23 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
LIMD2Q9BT23 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC10.38□□□□□ -0.75
LIMD2Q9BT23 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC10.38□□□□□ -0.75
LIMD2Q9BT23 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
LIMD2Q9BT23 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
LIMD2Q9BT23 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC10.38□□□□□ -0.75
LIMD2Q9BT23 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC10.38□□□□□ -0.75
LIMD2Q9BT23 HIPK3-203ENST00000456517 7399 ntAPPRIS P1 TSL 2 BASIC10.38□□□□□ -0.75
LIMD2Q9BT23 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
LIMD2Q9BT23 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC10.38□□□□□ -0.75
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms