Protein–RNA interactions for Protein: Q99732

LITAF, Lipopolysaccharide-induced tumor necrosis factor-alpha factor, humanhuman

Predictions only

Length 161 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LITAFQ99732 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC11.56□□□□□ -0.56
LITAFQ99732 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
LITAFQ99732 AL391256.1-201ENST00000443260 1855 ntBASIC11.56□□□□□ -0.56
LITAFQ99732 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC11.56□□□□□ -0.56
LITAFQ99732 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC11.56□□□□□ -0.56
LITAFQ99732 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC11.56□□□□□ -0.56
LITAFQ99732 FDX2-207ENST00000494368 584 ntTSL 4 BASIC11.56□□□□□ -0.56
LITAFQ99732 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
LITAFQ99732 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC11.56□□□□□ -0.56
LITAFQ99732 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC11.56□□□□□ -0.56
LITAFQ99732 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
LITAFQ99732 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
LITAFQ99732 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC11.56□□□□□ -0.56
LITAFQ99732 ETFA-216ENST00000560726 942 ntTSL 3 BASIC11.56□□□□□ -0.56
LITAFQ99732 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC11.56□□□□□ -0.56
LITAFQ99732 AC233263.1-201ENST00000578059 224 ntBASIC11.56□□□□□ -0.56
LITAFQ99732 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC11.56□□□□□ -0.56
LITAFQ99732 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC11.56□□□□□ -0.56
LITAFQ99732 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
LITAFQ99732 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
LITAFQ99732 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC11.56□□□□□ -0.56
LITAFQ99732 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
LITAFQ99732 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC11.56□□□□□ -0.56
LITAFQ99732 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
LITAFQ99732 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
LITAFQ99732 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
LITAFQ99732 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC11.56□□□□□ -0.56
LITAFQ99732 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
LITAFQ99732 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
LITAFQ99732 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC11.56□□□□□ -0.56
LITAFQ99732 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC11.56□□□□□ -0.56
LITAFQ99732 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC11.56□□□□□ -0.56
LITAFQ99732 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
LITAFQ99732 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC11.56□□□□□ -0.56
LITAFQ99732 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC11.55□□□□□ -0.56
LITAFQ99732 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
LITAFQ99732 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC11.55□□□□□ -0.56
LITAFQ99732 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
LITAFQ99732 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC11.55□□□□□ -0.56
LITAFQ99732 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
LITAFQ99732 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
LITAFQ99732 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
LITAFQ99732 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
LITAFQ99732 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC11.55□□□□□ -0.56
LITAFQ99732 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
LITAFQ99732 AC022532.1-201ENST00000624563 1728 ntBASIC11.55□□□□□ -0.56
LITAFQ99732 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
LITAFQ99732 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
LITAFQ99732 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
LITAFQ99732 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
LITAFQ99732 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
LITAFQ99732 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
LITAFQ99732 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC11.55□□□□□ -0.56
LITAFQ99732 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
LITAFQ99732 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
LITAFQ99732 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC11.55□□□□□ -0.56
LITAFQ99732 LY6E-205ENST00000519611 635 ntTSL 3 BASIC11.55□□□□□ -0.56
LITAFQ99732 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC11.55□□□□□ -0.56
LITAFQ99732 UNC93B5-201ENST00000530315 699 ntBASIC11.55□□□□□ -0.56
LITAFQ99732 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC11.55□□□□□ -0.56
LITAFQ99732 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
LITAFQ99732 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
LITAFQ99732 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC11.55□□□□□ -0.56
LITAFQ99732 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC11.55□□□□□ -0.56
LITAFQ99732 CR769767.2-201ENST00000622735 460 ntBASIC11.55□□□□□ -0.56
LITAFQ99732 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
LITAFQ99732 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC11.55□□□□□ -0.56
LITAFQ99732 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC11.55□□□□□ -0.56
LITAFQ99732 ME2P1-201ENST00000426028 1970 ntBASIC11.55□□□□□ -0.56
LITAFQ99732 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
LITAFQ99732 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
LITAFQ99732 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
LITAFQ99732 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC11.55□□□□□ -0.56
LITAFQ99732 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
LITAFQ99732 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
LITAFQ99732 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
LITAFQ99732 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC11.55□□□□□ -0.56
LITAFQ99732 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC11.55□□□□□ -0.56
LITAFQ99732 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC11.55□□□□□ -0.56
LITAFQ99732 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC11.55□□□□□ -0.56
LITAFQ99732 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
LITAFQ99732 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC11.55□□□□□ -0.56
LITAFQ99732 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
LITAFQ99732 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC11.55□□□□□ -0.56
LITAFQ99732 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC11.54□□□□□ -0.56
LITAFQ99732 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
LITAFQ99732 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
LITAFQ99732 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC11.54□□□□□ -0.56
LITAFQ99732 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
LITAFQ99732 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC11.54□□□□□ -0.56
LITAFQ99732 TNRC18P2-201ENST00000417666 2714 ntBASIC11.54□□□□□ -0.56
LITAFQ99732 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC11.54□□□□□ -0.56
LITAFQ99732 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC11.54□□□□□ -0.56
LITAFQ99732 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
LITAFQ99732 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
LITAFQ99732 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
LITAFQ99732 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
LITAFQ99732 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
LITAFQ99732 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
LITAFQ99732 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC11.54□□□□□ -0.56
Retrieved 100 of 98,524 protein–RNA pairs in 50.8 ms