Protein–RNA interactions for Protein: Q96S66

CLCC1, Chloride channel CLIC-like protein 1, humanhuman

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCC1Q96S66 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CLCC1Q96S66 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC14.69□□□□□ -0.06
CLCC1Q96S66 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC14.69□□□□□ -0.06
CLCC1Q96S66 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CLCC1Q96S66 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC14.69□□□□□ -0.06
CLCC1Q96S66 AC145285.6-201ENST00000604632 637 ntBASIC14.69□□□□□ -0.06
CLCC1Q96S66 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CLCC1Q96S66 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CLCC1Q96S66 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CLCC1Q96S66 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC14.69□□□□□ -0.06
CLCC1Q96S66 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC14.69□□□□□ -0.06
CLCC1Q96S66 AGK-211ENST00000629555 2765 ntTSL 5 BASIC14.69□□□□□ -0.06
CLCC1Q96S66 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CLCC1Q96S66 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CLCC1Q96S66 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC14.69□□□□□ -0.06
CLCC1Q96S66 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
CLCC1Q96S66 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC14.69□□□□□ -0.06
CLCC1Q96S66 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CLCC1Q96S66 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CLCC1Q96S66 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CLCC1Q96S66 AC009102.3-201ENST00000623118 1491 ntBASIC14.69□□□□□ -0.06
CLCC1Q96S66 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CLCC1Q96S66 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CLCC1Q96S66 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CLCC1Q96S66 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
CLCC1Q96S66 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC14.69□□□□□ -0.06
CLCC1Q96S66 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CLCC1Q96S66 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CLCC1Q96S66 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
CLCC1Q96S66 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC14.68□□□□□ -0.06
CLCC1Q96S66 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC14.68□□□□□ -0.06
CLCC1Q96S66 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
CLCC1Q96S66 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CLCC1Q96S66 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
CLCC1Q96S66 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC14.68□□□□□ -0.06
CLCC1Q96S66 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC14.68□□□□□ -0.06
CLCC1Q96S66 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC14.68□□□□□ -0.06
CLCC1Q96S66 HLA-DQB1-201ENST00000374943 1656 ntBASIC14.68□□□□□ -0.06
CLCC1Q96S66 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC14.68□□□□□ -0.06
CLCC1Q96S66 HOXB1-202ENST00000577092 1414 ntBASIC14.68□□□□□ -0.06
CLCC1Q96S66 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CLCC1Q96S66 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC14.68□□□□□ -0.06
CLCC1Q96S66 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CLCC1Q96S66 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC14.68□□□□□ -0.06
CLCC1Q96S66 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC14.68□□□□□ -0.06
CLCC1Q96S66 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CLCC1Q96S66 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CLCC1Q96S66 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC14.68□□□□□ -0.06
CLCC1Q96S66 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CLCC1Q96S66 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CLCC1Q96S66 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CLCC1Q96S66 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC14.68□□□□□ -0.06
CLCC1Q96S66 SLC25A3P1-201ENST00000443844 931 ntBASIC14.68□□□□□ -0.06
CLCC1Q96S66 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC14.68□□□□□ -0.06
CLCC1Q96S66 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC14.68□□□□□ -0.06
CLCC1Q96S66 RPS20-210ENST00000523936 899 ntTSL 2 BASIC14.68□□□□□ -0.06
CLCC1Q96S66 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC14.68□□□□□ -0.06
CLCC1Q96S66 NT5C-210ENST00000582160 860 ntTSL 2 BASIC14.68□□□□□ -0.06
CLCC1Q96S66 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC14.68□□□□□ -0.06
CLCC1Q96S66 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
CLCC1Q96S66 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CLCC1Q96S66 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
CLCC1Q96S66 PTPN9-206ENST00000618819 7813 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
CLCC1Q96S66 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC14.68□□□□□ -0.06
CLCC1Q96S66 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CLCC1Q96S66 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
CLCC1Q96S66 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CLCC1Q96S66 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CLCC1Q96S66 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC14.68□□□□□ -0.06
CLCC1Q96S66 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CLCC1Q96S66 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC14.68□□□□□ -0.06
CLCC1Q96S66 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CLCC1Q96S66 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CLCC1Q96S66 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CLCC1Q96S66 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CLCC1Q96S66 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CLCC1Q96S66 PHGDH-209ENST00000641074 1780 ntBASIC14.68□□□□□ -0.06
CLCC1Q96S66 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CLCC1Q96S66 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CLCC1Q96S66 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
CLCC1Q96S66 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC14.67□□□□□ -0.06
CLCC1Q96S66 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC14.67□□□□□ -0.06
CLCC1Q96S66 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
CLCC1Q96S66 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
CLCC1Q96S66 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC14.67□□□□□ -0.06
CLCC1Q96S66 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC14.67□□□□□ -0.06
CLCC1Q96S66 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC14.67□□□□□ -0.06
CLCC1Q96S66 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CLCC1Q96S66 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC14.67□□□□□ -0.06
CLCC1Q96S66 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CLCC1Q96S66 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CLCC1Q96S66 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CLCC1Q96S66 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC14.67□□□□□ -0.06
CLCC1Q96S66 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
CLCC1Q96S66 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CLCC1Q96S66 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
CLCC1Q96S66 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CLCC1Q96S66 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC14.67□□□□□ -0.06
CLCC1Q96S66 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
CLCC1Q96S66 MIR149-201ENST00000384879 89 ntBASIC14.67□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms