Protein–RNA interactions for Protein: Q96L08

SUSD3, Sushi domain-containing protein 3, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUSD3Q96L08 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC18.28■□□□□ 0.52
SUSD3Q96L08 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC18.28■□□□□ 0.52
SUSD3Q96L08 AC016396.2-201ENST00000562575 1417 ntBASIC18.28■□□□□ 0.52
SUSD3Q96L08 GNAS-203ENST00000306120 1878 ntBASIC18.28■□□□□ 0.52
SUSD3Q96L08 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC18.28■□□□□ 0.52
SUSD3Q96L08 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SUSD3Q96L08 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC18.28■□□□□ 0.52
SUSD3Q96L08 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SUSD3Q96L08 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC18.28■□□□□ 0.52
SUSD3Q96L08 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SUSD3Q96L08 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SUSD3Q96L08 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
SUSD3Q96L08 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SUSD3Q96L08 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SUSD3Q96L08 AL138688.1-201ENST00000624851 1594 ntBASIC18.27■□□□□ 0.52
SUSD3Q96L08 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SUSD3Q96L08 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
SUSD3Q96L08 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
SUSD3Q96L08 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
SUSD3Q96L08 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SUSD3Q96L08 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SUSD3Q96L08 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
SUSD3Q96L08 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC18.27■□□□□ 0.52
SUSD3Q96L08 AC211486.1-202ENST00000416371 468 ntBASIC18.27■□□□□ 0.52
SUSD3Q96L08 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC18.27■□□□□ 0.52
SUSD3Q96L08 HTR5BP-201ENST00000430851 1154 ntBASIC18.27■□□□□ 0.52
SUSD3Q96L08 AC074386.1-202ENST00000463561 864 ntBASIC18.27■□□□□ 0.52
SUSD3Q96L08 AC211476.1-201ENST00000503899 468 ntBASIC18.27■□□□□ 0.52
SUSD3Q96L08 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC18.27■□□□□ 0.52
SUSD3Q96L08 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC18.27■□□□□ 0.52
SUSD3Q96L08 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SUSD3Q96L08 AP001160.2-201ENST00000596071 487 ntBASIC18.27■□□□□ 0.52
SUSD3Q96L08 AC079781.4-201ENST00000641908 219 ntBASIC18.27■□□□□ 0.52
SUSD3Q96L08 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
SUSD3Q96L08 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
SUSD3Q96L08 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC18.27■□□□□ 0.51
SUSD3Q96L08 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
SUSD3Q96L08 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.51
SUSD3Q96L08 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
SUSD3Q96L08 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SUSD3Q96L08 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
SUSD3Q96L08 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SUSD3Q96L08 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SUSD3Q96L08 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SUSD3Q96L08 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
SUSD3Q96L08 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
SUSD3Q96L08 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SUSD3Q96L08 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SUSD3Q96L08 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
SUSD3Q96L08 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
SUSD3Q96L08 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SUSD3Q96L08 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
SUSD3Q96L08 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SUSD3Q96L08 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC18.26■□□□□ 0.51
SUSD3Q96L08 AP006288.1-201ENST00000446065 395 ntBASIC18.26■□□□□ 0.51
SUSD3Q96L08 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC18.26■□□□□ 0.51
SUSD3Q96L08 AC107918.2-201ENST00000530817 355 ntBASIC18.26■□□□□ 0.51
SUSD3Q96L08 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC18.26■□□□□ 0.51
SUSD3Q96L08 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC18.26■□□□□ 0.51
SUSD3Q96L08 MIR4469-201ENST00000583919 79 ntBASIC18.26■□□□□ 0.51
SUSD3Q96L08 AL078644.1-201ENST00000609881 752 ntBASIC18.26■□□□□ 0.51
SUSD3Q96L08 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC18.26■□□□□ 0.51
SUSD3Q96L08 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SUSD3Q96L08 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
SUSD3Q96L08 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
SUSD3Q96L08 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
SUSD3Q96L08 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC18.26■□□□□ 0.51
SUSD3Q96L08 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SUSD3Q96L08 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
SUSD3Q96L08 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SUSD3Q96L08 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
SUSD3Q96L08 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
SUSD3Q96L08 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
SUSD3Q96L08 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SUSD3Q96L08 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
SUSD3Q96L08 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
SUSD3Q96L08 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SUSD3Q96L08 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
SUSD3Q96L08 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC18.25■□□□□ 0.51
SUSD3Q96L08 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
SUSD3Q96L08 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC18.25■□□□□ 0.51
SUSD3Q96L08 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
SUSD3Q96L08 TPR-209ENST00000613151 2478 ntTSL 5 BASIC18.25■□□□□ 0.51
SUSD3Q96L08 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SUSD3Q96L08 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
SUSD3Q96L08 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SUSD3Q96L08 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC18.25■□□□□ 0.51
SUSD3Q96L08 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC18.25■□□□□ 0.51
SUSD3Q96L08 SLC25A1P3-201ENST00000395415 828 ntBASIC18.25■□□□□ 0.51
SUSD3Q96L08 RPS8P6-201ENST00000426177 609 ntBASIC18.25■□□□□ 0.51
SUSD3Q96L08 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC18.25■□□□□ 0.51
SUSD3Q96L08 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC18.25■□□□□ 0.51
SUSD3Q96L08 MED16-214ENST00000617672 554 ntTSL 5 BASIC18.25■□□□□ 0.51
SUSD3Q96L08 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC18.25■□□□□ 0.51
SUSD3Q96L08 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC18.25■□□□□ 0.51
SUSD3Q96L08 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC18.25■□□□□ 0.51
SUSD3Q96L08 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC18.25■□□□□ 0.51
SUSD3Q96L08 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
SUSD3Q96L08 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SUSD3Q96L08 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms