Protein–RNA interactions for Protein: Q8NF99

ZNF397, Zinc finger protein 397, humanhuman

Predicted RBP Predictions only

Length 534 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF397Q8NF99 AK4P3-201ENST00000418260 669 ntBASIC19.26■□□□□ 0.67
ZNF397Q8NF99 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
ZNF397Q8NF99 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC19.26■□□□□ 0.67
ZNF397Q8NF99 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
ZNF397Q8NF99 RASA4DP-201ENST00000460726 1199 ntBASIC19.26■□□□□ 0.67
ZNF397Q8NF99 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC19.26■□□□□ 0.67
ZNF397Q8NF99 LTBR-211ENST00000543190 785 ntTSL 3 BASIC19.26■□□□□ 0.67
ZNF397Q8NF99 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC19.26■□□□□ 0.67
ZNF397Q8NF99 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC19.26■□□□□ 0.67
ZNF397Q8NF99 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
ZNF397Q8NF99 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC19.26■□□□□ 0.67
ZNF397Q8NF99 FRMD6-AS1-201ENST00000617151 2229 ntBASIC19.26■□□□□ 0.67
ZNF397Q8NF99 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
ZNF397Q8NF99 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC19.26■□□□□ 0.67
ZNF397Q8NF99 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
ZNF397Q8NF99 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC19.25■□□□□ 0.67
ZNF397Q8NF99 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
ZNF397Q8NF99 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
ZNF397Q8NF99 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
ZNF397Q8NF99 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC19.25■□□□□ 0.67
ZNF397Q8NF99 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC19.25■□□□□ 0.67
ZNF397Q8NF99 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
ZNF397Q8NF99 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
ZNF397Q8NF99 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ZNF397Q8NF99 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ZNF397Q8NF99 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ZNF397Q8NF99 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC19.25■□□□□ 0.67
ZNF397Q8NF99 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC19.25■□□□□ 0.67
ZNF397Q8NF99 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ZNF397Q8NF99 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
ZNF397Q8NF99 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
ZNF397Q8NF99 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ZNF397Q8NF99 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
ZNF397Q8NF99 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
ZNF397Q8NF99 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC19.25■□□□□ 0.67
ZNF397Q8NF99 TMPOP1-202ENST00000424642 1267 ntBASIC19.25■□□□□ 0.67
ZNF397Q8NF99 HOMER2P1-201ENST00000455653 964 ntBASIC19.25■□□□□ 0.67
ZNF397Q8NF99 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC19.25■□□□□ 0.67
ZNF397Q8NF99 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC19.25■□□□□ 0.67
ZNF397Q8NF99 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
ZNF397Q8NF99 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC19.25■□□□□ 0.67
ZNF397Q8NF99 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
ZNF397Q8NF99 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC19.25■□□□□ 0.67
ZNF397Q8NF99 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ZNF397Q8NF99 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ZNF397Q8NF99 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC19.25■□□□□ 0.67
ZNF397Q8NF99 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
ZNF397Q8NF99 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ZNF397Q8NF99 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC19.24■□□□□ 0.67
ZNF397Q8NF99 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
ZNF397Q8NF99 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
ZNF397Q8NF99 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
ZNF397Q8NF99 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC19.24■□□□□ 0.67
ZNF397Q8NF99 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
ZNF397Q8NF99 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC19.24■□□□□ 0.67
ZNF397Q8NF99 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
ZNF397Q8NF99 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
ZNF397Q8NF99 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
ZNF397Q8NF99 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC19.24■□□□□ 0.67
ZNF397Q8NF99 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
ZNF397Q8NF99 FAM210CP-201ENST00000445714 574 ntBASIC19.24■□□□□ 0.67
ZNF397Q8NF99 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
ZNF397Q8NF99 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
ZNF397Q8NF99 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
ZNF397Q8NF99 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC19.24■□□□□ 0.67
ZNF397Q8NF99 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
ZNF397Q8NF99 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
ZNF397Q8NF99 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
ZNF397Q8NF99 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
ZNF397Q8NF99 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
ZNF397Q8NF99 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
ZNF397Q8NF99 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
ZNF397Q8NF99 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
ZNF397Q8NF99 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
ZNF397Q8NF99 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
ZNF397Q8NF99 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
ZNF397Q8NF99 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC19.23■□□□□ 0.67
ZNF397Q8NF99 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC19.23■□□□□ 0.67
ZNF397Q8NF99 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
ZNF397Q8NF99 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
ZNF397Q8NF99 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC19.23■□□□□ 0.67
ZNF397Q8NF99 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
ZNF397Q8NF99 KRT8P47-201ENST00000604727 1398 ntBASIC19.23■□□□□ 0.67
ZNF397Q8NF99 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
ZNF397Q8NF99 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
ZNF397Q8NF99 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
ZNF397Q8NF99 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC19.23■□□□□ 0.67
ZNF397Q8NF99 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC19.23■□□□□ 0.67
ZNF397Q8NF99 SPDYE15P-201ENST00000424157 909 ntBASIC19.23■□□□□ 0.67
ZNF397Q8NF99 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
ZNF397Q8NF99 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
ZNF397Q8NF99 SNX5-210ENST00000481323 562 ntTSL 3 BASIC19.23■□□□□ 0.67
ZNF397Q8NF99 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
ZNF397Q8NF99 AC063952.2-201ENST00000498792 1227 ntBASIC19.23■□□□□ 0.67
ZNF397Q8NF99 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
ZNF397Q8NF99 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC19.23■□□□□ 0.67
ZNF397Q8NF99 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
ZNF397Q8NF99 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC19.23■□□□□ 0.67
ZNF397Q8NF99 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
ZNF397Q8NF99 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms