Protein–RNA interactions for Protein: Q8NDP4

ZNF439, Zinc finger protein 439, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF439Q8NDP4 AC019129.2-201ENST00000609837 1235 ntBASIC14.41□□□□□ -0.1
ZNF439Q8NDP4 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
ZNF439Q8NDP4 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
ZNF439Q8NDP4 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
ZNF439Q8NDP4 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
ZNF439Q8NDP4 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC14.41□□□□□ -0.1
ZNF439Q8NDP4 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
ZNF439Q8NDP4 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
ZNF439Q8NDP4 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC14.41□□□□□ -0.1
ZNF439Q8NDP4 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
ZNF439Q8NDP4 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
ZNF439Q8NDP4 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
ZNF439Q8NDP4 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
ZNF439Q8NDP4 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC14.41□□□□□ -0.1
ZNF439Q8NDP4 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC14.41□□□□□ -0.1
ZNF439Q8NDP4 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC14.41□□□□□ -0.1
ZNF439Q8NDP4 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC14.41□□□□□ -0.1
ZNF439Q8NDP4 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
ZNF439Q8NDP4 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
ZNF439Q8NDP4 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
ZNF439Q8NDP4 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
ZNF439Q8NDP4 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC14.4□□□□□ -0.1
ZNF439Q8NDP4 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC14.4□□□□□ -0.1
ZNF439Q8NDP4 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
ZNF439Q8NDP4 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
ZNF439Q8NDP4 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
ZNF439Q8NDP4 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
ZNF439Q8NDP4 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
ZNF439Q8NDP4 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
ZNF439Q8NDP4 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
ZNF439Q8NDP4 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC14.4□□□□□ -0.1
ZNF439Q8NDP4 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
ZNF439Q8NDP4 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
ZNF439Q8NDP4 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
ZNF439Q8NDP4 TSSC2-201ENST00000450217 709 ntBASIC14.4□□□□□ -0.1
ZNF439Q8NDP4 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC14.4□□□□□ -0.1
ZNF439Q8NDP4 MEG3-211ENST00000452514 461 ntTSL 3 BASIC14.4□□□□□ -0.1
ZNF439Q8NDP4 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC14.4□□□□□ -0.1
ZNF439Q8NDP4 AC091607.1-201ENST00000490318 1060 ntBASIC14.4□□□□□ -0.1
ZNF439Q8NDP4 AC122714.2-201ENST00000502787 707 ntBASIC14.4□□□□□ -0.1
ZNF439Q8NDP4 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC14.4□□□□□ -0.1
ZNF439Q8NDP4 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
ZNF439Q8NDP4 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC14.4□□□□□ -0.1
ZNF439Q8NDP4 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC14.4□□□□□ -0.1
ZNF439Q8NDP4 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC14.4□□□□□ -0.1
ZNF439Q8NDP4 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
ZNF439Q8NDP4 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC14.4□□□□□ -0.1
ZNF439Q8NDP4 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC14.4□□□□□ -0.1
ZNF439Q8NDP4 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC14.4□□□□□ -0.1
ZNF439Q8NDP4 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC14.4□□□□□ -0.1
ZNF439Q8NDP4 AL139327.4-201ENST00000612362 153 ntBASIC14.4□□□□□ -0.1
ZNF439Q8NDP4 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC14.4□□□□□ -0.1
ZNF439Q8NDP4 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC14.4□□□□□ -0.1
ZNF439Q8NDP4 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
ZNF439Q8NDP4 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
ZNF439Q8NDP4 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
ZNF439Q8NDP4 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
ZNF439Q8NDP4 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
ZNF439Q8NDP4 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
ZNF439Q8NDP4 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
ZNF439Q8NDP4 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
ZNF439Q8NDP4 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
ZNF439Q8NDP4 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
ZNF439Q8NDP4 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
ZNF439Q8NDP4 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC14.4□□□□□ -0.1
ZNF439Q8NDP4 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
ZNF439Q8NDP4 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
ZNF439Q8NDP4 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC14.39□□□□□ -0.11
ZNF439Q8NDP4 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
ZNF439Q8NDP4 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
ZNF439Q8NDP4 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC14.39□□□□□ -0.11
ZNF439Q8NDP4 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC14.39□□□□□ -0.11
ZNF439Q8NDP4 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
ZNF439Q8NDP4 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
ZNF439Q8NDP4 GPAT4-201ENST00000396987 6298 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
ZNF439Q8NDP4 IER3-202ENST00000376377 1350 ntBASIC14.39□□□□□ -0.11
ZNF439Q8NDP4 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC14.39□□□□□ -0.11
ZNF439Q8NDP4 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC14.39□□□□□ -0.11
ZNF439Q8NDP4 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC14.39□□□□□ -0.11
ZNF439Q8NDP4 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
ZNF439Q8NDP4 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
ZNF439Q8NDP4 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
ZNF439Q8NDP4 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
ZNF439Q8NDP4 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
ZNF439Q8NDP4 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
ZNF439Q8NDP4 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
ZNF439Q8NDP4 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC14.39□□□□□ -0.11
ZNF439Q8NDP4 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
ZNF439Q8NDP4 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
ZNF439Q8NDP4 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC14.39□□□□□ -0.11
ZNF439Q8NDP4 AP005901.3-202ENST00000581653 237 ntBASIC14.39□□□□□ -0.11
ZNF439Q8NDP4 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC14.39□□□□□ -0.11
ZNF439Q8NDP4 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC14.39□□□□□ -0.11
ZNF439Q8NDP4 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC14.39□□□□□ -0.11
ZNF439Q8NDP4 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
ZNF439Q8NDP4 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
ZNF439Q8NDP4 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC14.39□□□□□ -0.11
ZNF439Q8NDP4 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC14.39□□□□□ -0.11
ZNF439Q8NDP4 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
ZNF439Q8NDP4 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms