Protein–RNA interactions for Protein: Q8N4T4

ARHGEF39, Rho guanine nucleotide exchange factor 39, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39Q8N4T4 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
ARHGEF39Q8N4T4 AC104109.2-201ENST00000602919 1418 ntBASIC16.34■□□□□ 0.21
ARHGEF39Q8N4T4 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC16.34■□□□□ 0.21
ARHGEF39Q8N4T4 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC16.34■□□□□ 0.21
ARHGEF39Q8N4T4 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
ARHGEF39Q8N4T4 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
ARHGEF39Q8N4T4 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC16.33■□□□□ 0.21
ARHGEF39Q8N4T4 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC16.33■□□□□ 0.21
ARHGEF39Q8N4T4 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC16.33■□□□□ 0.21
ARHGEF39Q8N4T4 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.21
ARHGEF39Q8N4T4 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.21
ARHGEF39Q8N4T4 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
ARHGEF39Q8N4T4 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.21
ARHGEF39Q8N4T4 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
ARHGEF39Q8N4T4 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
ARHGEF39Q8N4T4 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC16.33■□□□□ 0.21
ARHGEF39Q8N4T4 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
ARHGEF39Q8N4T4 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
ARHGEF39Q8N4T4 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
ARHGEF39Q8N4T4 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
ARHGEF39Q8N4T4 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC16.33■□□□□ 0.2
ARHGEF39Q8N4T4 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC16.33■□□□□ 0.2
ARHGEF39Q8N4T4 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC16.33■□□□□ 0.2
ARHGEF39Q8N4T4 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
ARHGEF39Q8N4T4 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC16.33■□□□□ 0.2
ARHGEF39Q8N4T4 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
ARHGEF39Q8N4T4 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC16.33■□□□□ 0.2
ARHGEF39Q8N4T4 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
ARHGEF39Q8N4T4 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC16.33■□□□□ 0.2
ARHGEF39Q8N4T4 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
ARHGEF39Q8N4T4 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
ARHGEF39Q8N4T4 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
ARHGEF39Q8N4T4 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
ARHGEF39Q8N4T4 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
ARHGEF39Q8N4T4 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
ARHGEF39Q8N4T4 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
ARHGEF39Q8N4T4 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC16.33■□□□□ 0.2
ARHGEF39Q8N4T4 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
ARHGEF39Q8N4T4 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC16.33■□□□□ 0.2
ARHGEF39Q8N4T4 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC16.33■□□□□ 0.2
ARHGEF39Q8N4T4 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
ARHGEF39Q8N4T4 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
ARHGEF39Q8N4T4 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
ARHGEF39Q8N4T4 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
ARHGEF39Q8N4T4 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
ARHGEF39Q8N4T4 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
ARHGEF39Q8N4T4 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
ARHGEF39Q8N4T4 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
ARHGEF39Q8N4T4 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
ARHGEF39Q8N4T4 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
ARHGEF39Q8N4T4 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
ARHGEF39Q8N4T4 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
ARHGEF39Q8N4T4 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
ARHGEF39Q8N4T4 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC16.32■□□□□ 0.2
ARHGEF39Q8N4T4 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
ARHGEF39Q8N4T4 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
ARHGEF39Q8N4T4 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
ARHGEF39Q8N4T4 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC16.32■□□□□ 0.2
ARHGEF39Q8N4T4 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC16.32■□□□□ 0.2
ARHGEF39Q8N4T4 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
ARHGEF39Q8N4T4 MIR574-201ENST00000385209 96 ntBASIC16.32■□□□□ 0.2
ARHGEF39Q8N4T4 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
ARHGEF39Q8N4T4 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC16.32■□□□□ 0.2
ARHGEF39Q8N4T4 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
ARHGEF39Q8N4T4 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
ARHGEF39Q8N4T4 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
ARHGEF39Q8N4T4 AC108073.2-201ENST00000464002 357 ntBASIC16.32■□□□□ 0.2
ARHGEF39Q8N4T4 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
ARHGEF39Q8N4T4 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
ARHGEF39Q8N4T4 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC16.32■□□□□ 0.2
ARHGEF39Q8N4T4 OR7E47P-204ENST00000575924 449 ntBASIC16.32■□□□□ 0.2
ARHGEF39Q8N4T4 PIN1-206ENST00000587625 878 ntTSL 2 BASIC16.32■□□□□ 0.2
ARHGEF39Q8N4T4 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
ARHGEF39Q8N4T4 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC16.32■□□□□ 0.2
ARHGEF39Q8N4T4 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
ARHGEF39Q8N4T4 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC16.32■□□□□ 0.2
ARHGEF39Q8N4T4 AC093525.9-201ENST00000624961 1746 ntBASIC16.32■□□□□ 0.2
ARHGEF39Q8N4T4 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC16.32■□□□□ 0.2
ARHGEF39Q8N4T4 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
ARHGEF39Q8N4T4 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
ARHGEF39Q8N4T4 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
ARHGEF39Q8N4T4 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ARHGEF39Q8N4T4 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
ARHGEF39Q8N4T4 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
ARHGEF39Q8N4T4 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC16.31■□□□□ 0.2
ARHGEF39Q8N4T4 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC16.31■□□□□ 0.2
ARHGEF39Q8N4T4 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
ARHGEF39Q8N4T4 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
ARHGEF39Q8N4T4 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
ARHGEF39Q8N4T4 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ARHGEF39Q8N4T4 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC16.31■□□□□ 0.2
ARHGEF39Q8N4T4 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC16.31■□□□□ 0.2
ARHGEF39Q8N4T4 EGFEM1P-202ENST00000431685 1563 ntBASIC16.31■□□□□ 0.2
ARHGEF39Q8N4T4 AC026471.1-201ENST00000564629 3026 ntBASIC16.31■□□□□ 0.2
ARHGEF39Q8N4T4 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
ARHGEF39Q8N4T4 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
ARHGEF39Q8N4T4 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ARHGEF39Q8N4T4 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
ARHGEF39Q8N4T4 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
ARHGEF39Q8N4T4 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms