Protein–RNA interactions for Protein: Q8IZC6

COL27A1, Collagen alpha-1(XXVII) chain, humanhuman

Predicted RBP Predictions only

Length 1,860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1Q8IZC6 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC16.14■□□□□ 0.17
COL27A1Q8IZC6 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
COL27A1Q8IZC6 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
COL27A1Q8IZC6 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
COL27A1Q8IZC6 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
COL27A1Q8IZC6 NME9-203ENST00000383180 2133 ntTSL 2 BASIC16.14■□□□□ 0.17
COL27A1Q8IZC6 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.17
COL27A1Q8IZC6 MIR943-201ENST00000401286 94 ntBASIC16.14■□□□□ 0.17
COL27A1Q8IZC6 HCG4-201ENST00000418983 998 ntBASIC16.14■□□□□ 0.17
COL27A1Q8IZC6 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC16.14■□□□□ 0.17
COL27A1Q8IZC6 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC16.14■□□□□ 0.17
COL27A1Q8IZC6 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC16.14■□□□□ 0.17
COL27A1Q8IZC6 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
COL27A1Q8IZC6 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC16.14■□□□□ 0.17
COL27A1Q8IZC6 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC16.14■□□□□ 0.17
COL27A1Q8IZC6 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
COL27A1Q8IZC6 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC16.14■□□□□ 0.17
COL27A1Q8IZC6 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
COL27A1Q8IZC6 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
COL27A1Q8IZC6 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
COL27A1Q8IZC6 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC16.13■□□□□ 0.17
COL27A1Q8IZC6 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
COL27A1Q8IZC6 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC16.13■□□□□ 0.17
COL27A1Q8IZC6 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
COL27A1Q8IZC6 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC16.13■□□□□ 0.17
COL27A1Q8IZC6 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
COL27A1Q8IZC6 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC16.13■□□□□ 0.17
COL27A1Q8IZC6 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
COL27A1Q8IZC6 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC16.13■□□□□ 0.17
COL27A1Q8IZC6 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
COL27A1Q8IZC6 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC16.13■□□□□ 0.17
COL27A1Q8IZC6 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC16.13■□□□□ 0.17
COL27A1Q8IZC6 OARD1-208ENST00000469104 704 ntTSL 2 BASIC16.13■□□□□ 0.17
COL27A1Q8IZC6 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
COL27A1Q8IZC6 KRT8P23-201ENST00000560090 1207 ntBASIC16.13■□□□□ 0.17
COL27A1Q8IZC6 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC16.13■□□□□ 0.17
COL27A1Q8IZC6 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC16.13■□□□□ 0.17
COL27A1Q8IZC6 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC16.13■□□□□ 0.17
COL27A1Q8IZC6 EGFEM1P-202ENST00000431685 1563 ntBASIC16.13■□□□□ 0.17
COL27A1Q8IZC6 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
COL27A1Q8IZC6 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
COL27A1Q8IZC6 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
COL27A1Q8IZC6 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
COL27A1Q8IZC6 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
COL27A1Q8IZC6 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
COL27A1Q8IZC6 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC16.12■□□□□ 0.17
COL27A1Q8IZC6 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
COL27A1Q8IZC6 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC16.12■□□□□ 0.17
COL27A1Q8IZC6 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
COL27A1Q8IZC6 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
COL27A1Q8IZC6 SPDYE7P-202ENST00000420373 878 ntBASIC16.12■□□□□ 0.17
COL27A1Q8IZC6 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
COL27A1Q8IZC6 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
COL27A1Q8IZC6 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC16.12■□□□□ 0.17
COL27A1Q8IZC6 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
COL27A1Q8IZC6 RNA5SP421-201ENST00000516864 134 ntBASIC16.12■□□□□ 0.17
COL27A1Q8IZC6 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
COL27A1Q8IZC6 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC16.12■□□□□ 0.17
COL27A1Q8IZC6 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
COL27A1Q8IZC6 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC16.12■□□□□ 0.17
COL27A1Q8IZC6 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC16.12■□□□□ 0.17
COL27A1Q8IZC6 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
COL27A1Q8IZC6 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
COL27A1Q8IZC6 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
COL27A1Q8IZC6 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC16.12■□□□□ 0.17
COL27A1Q8IZC6 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC16.12■□□□□ 0.17
COL27A1Q8IZC6 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC16.12■□□□□ 0.17
COL27A1Q8IZC6 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC16.12■□□□□ 0.17
COL27A1Q8IZC6 AC100757.3-201ENST00000622361 1406 ntBASIC16.12■□□□□ 0.17
COL27A1Q8IZC6 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC16.12■□□□□ 0.17
COL27A1Q8IZC6 AL355312.1-201ENST00000407115 2176 ntBASIC16.12■□□□□ 0.17
COL27A1Q8IZC6 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
COL27A1Q8IZC6 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
COL27A1Q8IZC6 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
COL27A1Q8IZC6 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
COL27A1Q8IZC6 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC16.12■□□□□ 0.17
COL27A1Q8IZC6 AC008267.7-201ENST00000624570 1194 ntBASIC16.12■□□□□ 0.17
COL27A1Q8IZC6 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
COL27A1Q8IZC6 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
COL27A1Q8IZC6 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
COL27A1Q8IZC6 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
COL27A1Q8IZC6 HARS-204ENST00000438307 1789 ntTSL 2 BASIC16.11■□□□□ 0.17
COL27A1Q8IZC6 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
COL27A1Q8IZC6 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
COL27A1Q8IZC6 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
COL27A1Q8IZC6 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC16.11■□□□□ 0.17
COL27A1Q8IZC6 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
COL27A1Q8IZC6 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
COL27A1Q8IZC6 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC16.11■□□□□ 0.17
COL27A1Q8IZC6 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
COL27A1Q8IZC6 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
COL27A1Q8IZC6 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
COL27A1Q8IZC6 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
COL27A1Q8IZC6 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
COL27A1Q8IZC6 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC16.11■□□□□ 0.17
COL27A1Q8IZC6 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
COL27A1Q8IZC6 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
COL27A1Q8IZC6 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
COL27A1Q8IZC6 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC16.11■□□□□ 0.17
COL27A1Q8IZC6 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC16.11■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 44.7 ms