Protein–RNA interactions for Protein: Q8IX30

SCUBE3, Signal peptide, CUB and EGF-like domain-containing protein 3, humanhuman

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3Q8IX30 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC18.25■□□□□ 0.51
SCUBE3Q8IX30 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC18.25■□□□□ 0.51
SCUBE3Q8IX30 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC18.25■□□□□ 0.51
SCUBE3Q8IX30 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC18.25■□□□□ 0.51
SCUBE3Q8IX30 RNPS1P1-201ENST00000507437 918 ntBASIC18.25■□□□□ 0.51
SCUBE3Q8IX30 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC18.25■□□□□ 0.51
SCUBE3Q8IX30 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC18.25■□□□□ 0.51
SCUBE3Q8IX30 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC18.25■□□□□ 0.51
SCUBE3Q8IX30 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC18.25■□□□□ 0.51
SCUBE3Q8IX30 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC18.25■□□□□ 0.51
SCUBE3Q8IX30 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SCUBE3Q8IX30 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
SCUBE3Q8IX30 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
SCUBE3Q8IX30 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
SCUBE3Q8IX30 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SCUBE3Q8IX30 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SCUBE3Q8IX30 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SCUBE3Q8IX30 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SCUBE3Q8IX30 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC18.25■□□□□ 0.51
SCUBE3Q8IX30 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
SCUBE3Q8IX30 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC18.25■□□□□ 0.51
SCUBE3Q8IX30 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SCUBE3Q8IX30 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
SCUBE3Q8IX30 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SCUBE3Q8IX30 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
SCUBE3Q8IX30 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC18.24■□□□□ 0.51
SCUBE3Q8IX30 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SCUBE3Q8IX30 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC18.24■□□□□ 0.51
SCUBE3Q8IX30 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC18.24■□□□□ 0.51
SCUBE3Q8IX30 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SCUBE3Q8IX30 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SCUBE3Q8IX30 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC18.24■□□□□ 0.51
SCUBE3Q8IX30 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SCUBE3Q8IX30 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
SCUBE3Q8IX30 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SCUBE3Q8IX30 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SCUBE3Q8IX30 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC18.24■□□□□ 0.51
SCUBE3Q8IX30 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
SCUBE3Q8IX30 S100A2-206ENST00000497140 697 ntTSL 2 BASIC18.24■□□□□ 0.51
SCUBE3Q8IX30 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC18.24■□□□□ 0.51
SCUBE3Q8IX30 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC18.24■□□□□ 0.51
SCUBE3Q8IX30 AL160237.2-201ENST00000556165 472 ntBASIC18.24■□□□□ 0.51
SCUBE3Q8IX30 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC18.24■□□□□ 0.51
SCUBE3Q8IX30 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC18.24■□□□□ 0.51
SCUBE3Q8IX30 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC18.24■□□□□ 0.51
SCUBE3Q8IX30 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SCUBE3Q8IX30 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SCUBE3Q8IX30 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
SCUBE3Q8IX30 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC18.24■□□□□ 0.51
SCUBE3Q8IX30 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC18.24■□□□□ 0.51
SCUBE3Q8IX30 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SCUBE3Q8IX30 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
SCUBE3Q8IX30 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
SCUBE3Q8IX30 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SCUBE3Q8IX30 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
SCUBE3Q8IX30 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC18.23■□□□□ 0.51
SCUBE3Q8IX30 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SCUBE3Q8IX30 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
SCUBE3Q8IX30 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC18.23■□□□□ 0.51
SCUBE3Q8IX30 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SCUBE3Q8IX30 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SCUBE3Q8IX30 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SCUBE3Q8IX30 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
SCUBE3Q8IX30 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
SCUBE3Q8IX30 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SCUBE3Q8IX30 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC18.23■□□□□ 0.51
SCUBE3Q8IX30 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
SCUBE3Q8IX30 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
SCUBE3Q8IX30 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC18.23■□□□□ 0.51
SCUBE3Q8IX30 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
SCUBE3Q8IX30 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC18.23■□□□□ 0.51
SCUBE3Q8IX30 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC18.23■□□□□ 0.51
SCUBE3Q8IX30 AC025062.2-201ENST00000605477 670 ntBASIC18.23■□□□□ 0.51
SCUBE3Q8IX30 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC18.23■□□□□ 0.51
SCUBE3Q8IX30 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SCUBE3Q8IX30 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC18.23■□□□□ 0.51
SCUBE3Q8IX30 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC18.23■□□□□ 0.51
SCUBE3Q8IX30 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SCUBE3Q8IX30 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC18.23■□□□□ 0.51
SCUBE3Q8IX30 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SCUBE3Q8IX30 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
SCUBE3Q8IX30 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
SCUBE3Q8IX30 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SCUBE3Q8IX30 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SCUBE3Q8IX30 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SCUBE3Q8IX30 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
SCUBE3Q8IX30 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
SCUBE3Q8IX30 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
SCUBE3Q8IX30 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SCUBE3Q8IX30 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC18.22■□□□□ 0.51
SCUBE3Q8IX30 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SCUBE3Q8IX30 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SCUBE3Q8IX30 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
SCUBE3Q8IX30 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
SCUBE3Q8IX30 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
SCUBE3Q8IX30 GID4-202ENST00000376345 1391 ntTSL 3 BASIC18.22■□□□□ 0.51
SCUBE3Q8IX30 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
SCUBE3Q8IX30 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
SCUBE3Q8IX30 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
SCUBE3Q8IX30 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC18.22■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 65.9 ms