Protein–RNA interactions for Protein: Q8IVD9

NUDCD3, NudC domain-containing protein 3, humanhuman

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3Q8IVD9 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC17.28■□□□□ 0.36
NUDCD3Q8IVD9 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC17.28■□□□□ 0.36
NUDCD3Q8IVD9 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
NUDCD3Q8IVD9 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
NUDCD3Q8IVD9 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
NUDCD3Q8IVD9 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
NUDCD3Q8IVD9 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
NUDCD3Q8IVD9 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
NUDCD3Q8IVD9 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC17.27■□□□□ 0.36
NUDCD3Q8IVD9 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC17.27■□□□□ 0.36
NUDCD3Q8IVD9 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
NUDCD3Q8IVD9 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC17.27■□□□□ 0.36
NUDCD3Q8IVD9 AMT-250ENST00000637682 1823 ntTSL 5 BASIC17.27■□□□□ 0.36
NUDCD3Q8IVD9 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
NUDCD3Q8IVD9 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
NUDCD3Q8IVD9 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC17.27■□□□□ 0.36
NUDCD3Q8IVD9 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
NUDCD3Q8IVD9 NAPSB-206ENST00000562112 1266 ntBASIC17.27■□□□□ 0.36
NUDCD3Q8IVD9 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.36
NUDCD3Q8IVD9 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC17.27■□□□□ 0.36
NUDCD3Q8IVD9 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC17.27■□□□□ 0.36
NUDCD3Q8IVD9 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
NUDCD3Q8IVD9 GXYLT1P4-201ENST00000613576 1192 ntBASIC17.27■□□□□ 0.36
NUDCD3Q8IVD9 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC17.27■□□□□ 0.36
NUDCD3Q8IVD9 AC010947.1-201ENST00000623454 693 ntBASIC17.27■□□□□ 0.36
NUDCD3Q8IVD9 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC17.27■□□□□ 0.36
NUDCD3Q8IVD9 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
NUDCD3Q8IVD9 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
NUDCD3Q8IVD9 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
NUDCD3Q8IVD9 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
NUDCD3Q8IVD9 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.35
NUDCD3Q8IVD9 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
NUDCD3Q8IVD9 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.35
NUDCD3Q8IVD9 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
NUDCD3Q8IVD9 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
NUDCD3Q8IVD9 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
NUDCD3Q8IVD9 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
NUDCD3Q8IVD9 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
NUDCD3Q8IVD9 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC17.26■□□□□ 0.35
NUDCD3Q8IVD9 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
NUDCD3Q8IVD9 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
NUDCD3Q8IVD9 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC17.26■□□□□ 0.35
NUDCD3Q8IVD9 AC008741.2-201ENST00000612792 3115 ntBASIC17.26■□□□□ 0.35
NUDCD3Q8IVD9 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC17.26■□□□□ 0.35
NUDCD3Q8IVD9 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
NUDCD3Q8IVD9 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
NUDCD3Q8IVD9 PC-208ENST00000529047 1607 ntTSL 3 BASIC17.26■□□□□ 0.35
NUDCD3Q8IVD9 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
NUDCD3Q8IVD9 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
NUDCD3Q8IVD9 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
NUDCD3Q8IVD9 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC17.26■□□□□ 0.35
NUDCD3Q8IVD9 AC008550.1-201ENST00000511500 884 ntBASIC17.26■□□□□ 0.35
NUDCD3Q8IVD9 TMED1-207ENST00000591695 809 ntTSL 5 BASIC17.26■□□□□ 0.35
NUDCD3Q8IVD9 SNX21-213ENST00000614929 587 ntTSL 5 BASIC17.26■□□□□ 0.35
NUDCD3Q8IVD9 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
NUDCD3Q8IVD9 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC17.26■□□□□ 0.35
NUDCD3Q8IVD9 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC17.26■□□□□ 0.35
NUDCD3Q8IVD9 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC17.26■□□□□ 0.35
NUDCD3Q8IVD9 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC17.26■□□□□ 0.35
NUDCD3Q8IVD9 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
NUDCD3Q8IVD9 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
NUDCD3Q8IVD9 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
NUDCD3Q8IVD9 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
NUDCD3Q8IVD9 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
NUDCD3Q8IVD9 AC078925.2-201ENST00000624013 1973 ntBASIC17.26■□□□□ 0.35
NUDCD3Q8IVD9 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
NUDCD3Q8IVD9 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC17.25■□□□□ 0.35
NUDCD3Q8IVD9 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
NUDCD3Q8IVD9 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC17.25■□□□□ 0.35
NUDCD3Q8IVD9 AL391807.1-203ENST00000604392 2365 ntBASIC17.25■□□□□ 0.35
NUDCD3Q8IVD9 ADM-208ENST00000534464 1640 ntTSL 2 BASIC17.25■□□□□ 0.35
NUDCD3Q8IVD9 KRT17P2-201ENST00000300992 1314 ntBASIC17.25■□□□□ 0.35
NUDCD3Q8IVD9 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
NUDCD3Q8IVD9 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
NUDCD3Q8IVD9 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
NUDCD3Q8IVD9 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC17.25■□□□□ 0.35
NUDCD3Q8IVD9 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
NUDCD3Q8IVD9 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
NUDCD3Q8IVD9 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
NUDCD3Q8IVD9 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
NUDCD3Q8IVD9 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
NUDCD3Q8IVD9 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
NUDCD3Q8IVD9 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
NUDCD3Q8IVD9 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
NUDCD3Q8IVD9 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
NUDCD3Q8IVD9 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
NUDCD3Q8IVD9 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC17.25■□□□□ 0.35
NUDCD3Q8IVD9 KRT8P9-201ENST00000558927 1449 ntBASIC17.25■□□□□ 0.35
NUDCD3Q8IVD9 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
NUDCD3Q8IVD9 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC17.25■□□□□ 0.35
NUDCD3Q8IVD9 BAALC-201ENST00000297574 801 ntTSL 3 BASIC17.25■□□□□ 0.35
NUDCD3Q8IVD9 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
NUDCD3Q8IVD9 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
NUDCD3Q8IVD9 ECEL1P3-201ENST00000427961 737 ntBASIC17.25■□□□□ 0.35
NUDCD3Q8IVD9 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
NUDCD3Q8IVD9 KRT18P48-201ENST00000434763 852 ntBASIC17.25■□□□□ 0.35
NUDCD3Q8IVD9 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC17.25■□□□□ 0.35
NUDCD3Q8IVD9 AC002558.1-201ENST00000488906 803 ntBASIC17.25■□□□□ 0.35
NUDCD3Q8IVD9 GCSHP2-201ENST00000560971 527 ntBASIC17.25■□□□□ 0.35
NUDCD3Q8IVD9 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms