Protein–RNA interactions for Protein: Q8IV50

LYSMD2, LysM and putative peptidoglycan-binding domain-containing protein 2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2Q8IV50 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
LYSMD2Q8IV50 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
LYSMD2Q8IV50 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC15.27■□□□□ 0.04
LYSMD2Q8IV50 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
LYSMD2Q8IV50 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
LYSMD2Q8IV50 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
LYSMD2Q8IV50 SERF2-207ENST00000409614 582 ntTSL 2 BASIC15.27■□□□□ 0.04
LYSMD2Q8IV50 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
LYSMD2Q8IV50 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC15.27■□□□□ 0.04
LYSMD2Q8IV50 LY6E-205ENST00000519611 635 ntTSL 3 BASIC15.27■□□□□ 0.04
LYSMD2Q8IV50 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC15.27■□□□□ 0.04
LYSMD2Q8IV50 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
LYSMD2Q8IV50 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC15.27■□□□□ 0.04
LYSMD2Q8IV50 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC15.27■□□□□ 0.04
LYSMD2Q8IV50 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
LYSMD2Q8IV50 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC15.27■□□□□ 0.03
LYSMD2Q8IV50 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
LYSMD2Q8IV50 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.03
LYSMD2Q8IV50 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC15.27■□□□□ 0.03
LYSMD2Q8IV50 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
LYSMD2Q8IV50 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC15.27■□□□□ 0.03
LYSMD2Q8IV50 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
LYSMD2Q8IV50 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
LYSMD2Q8IV50 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC15.27■□□□□ 0.03
LYSMD2Q8IV50 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
LYSMD2Q8IV50 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
LYSMD2Q8IV50 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
LYSMD2Q8IV50 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC15.27■□□□□ 0.03
LYSMD2Q8IV50 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
LYSMD2Q8IV50 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
LYSMD2Q8IV50 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC15.26■□□□□ 0.03
LYSMD2Q8IV50 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC15.26■□□□□ 0.03
LYSMD2Q8IV50 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC15.26■□□□□ 0.03
LYSMD2Q8IV50 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC15.26■□□□□ 0.03
LYSMD2Q8IV50 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC15.26■□□□□ 0.03
LYSMD2Q8IV50 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
LYSMD2Q8IV50 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
LYSMD2Q8IV50 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
LYSMD2Q8IV50 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC15.26■□□□□ 0.03
LYSMD2Q8IV50 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
LYSMD2Q8IV50 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC15.26■□□□□ 0.03
LYSMD2Q8IV50 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC15.26■□□□□ 0.03
LYSMD2Q8IV50 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
LYSMD2Q8IV50 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
LYSMD2Q8IV50 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
LYSMD2Q8IV50 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
LYSMD2Q8IV50 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
LYSMD2Q8IV50 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
LYSMD2Q8IV50 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
LYSMD2Q8IV50 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
LYSMD2Q8IV50 AC239809.2-201ENST00000415381 517 ntBASIC15.26■□□□□ 0.03
LYSMD2Q8IV50 FAM207BP-201ENST00000447172 505 ntBASIC15.26■□□□□ 0.03
LYSMD2Q8IV50 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC15.26■□□□□ 0.03
LYSMD2Q8IV50 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
LYSMD2Q8IV50 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC15.26■□□□□ 0.03
LYSMD2Q8IV50 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC15.26■□□□□ 0.03
LYSMD2Q8IV50 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
LYSMD2Q8IV50 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
LYSMD2Q8IV50 CYP51A1P1-201ENST00000492267 1507 ntBASIC15.26■□□□□ 0.03
LYSMD2Q8IV50 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC15.26■□□□□ 0.03
LYSMD2Q8IV50 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
LYSMD2Q8IV50 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
LYSMD2Q8IV50 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
LYSMD2Q8IV50 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
LYSMD2Q8IV50 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
LYSMD2Q8IV50 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
LYSMD2Q8IV50 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
LYSMD2Q8IV50 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
LYSMD2Q8IV50 HLA-DQB2-231ENST00000435145 2026 ntBASIC15.26■□□□□ 0.03
LYSMD2Q8IV50 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
LYSMD2Q8IV50 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
LYSMD2Q8IV50 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
LYSMD2Q8IV50 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
LYSMD2Q8IV50 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC15.26■□□□□ 0.03
LYSMD2Q8IV50 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
LYSMD2Q8IV50 AC006058.4-201ENST00000624016 1670 ntBASIC15.25■□□□□ 0.03
LYSMD2Q8IV50 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC15.25■□□□□ 0.03
LYSMD2Q8IV50 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
LYSMD2Q8IV50 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
LYSMD2Q8IV50 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
LYSMD2Q8IV50 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
LYSMD2Q8IV50 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
LYSMD2Q8IV50 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
LYSMD2Q8IV50 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
LYSMD2Q8IV50 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC15.25■□□□□ 0.03
LYSMD2Q8IV50 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
LYSMD2Q8IV50 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
LYSMD2Q8IV50 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
LYSMD2Q8IV50 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC15.25■□□□□ 0.03
LYSMD2Q8IV50 AC036111.1-201ENST00000533973 1582 ntBASIC15.25■□□□□ 0.03
LYSMD2Q8IV50 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
LYSMD2Q8IV50 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
LYSMD2Q8IV50 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
LYSMD2Q8IV50 AC009949.1-201ENST00000623048 1830 ntBASIC15.25■□□□□ 0.03
LYSMD2Q8IV50 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
LYSMD2Q8IV50 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
LYSMD2Q8IV50 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
LYSMD2Q8IV50 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
LYSMD2Q8IV50 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
LYSMD2Q8IV50 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 59.9 ms