Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC18.4■□□□□ 0.54
RNF135Q8IUD6 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
RNF135Q8IUD6 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC18.4■□□□□ 0.54
RNF135Q8IUD6 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC18.4■□□□□ 0.54
RNF135Q8IUD6 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC18.4■□□□□ 0.54
RNF135Q8IUD6 TK1-204ENST00000590430 683 ntTSL 3 BASIC18.4■□□□□ 0.54
RNF135Q8IUD6 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC18.4■□□□□ 0.54
RNF135Q8IUD6 AC005498.2-205ENST00000593218 784 ntBASIC18.4■□□□□ 0.54
RNF135Q8IUD6 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
RNF135Q8IUD6 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC18.4■□□□□ 0.54
RNF135Q8IUD6 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC18.4■□□□□ 0.54
RNF135Q8IUD6 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC18.4■□□□□ 0.54
RNF135Q8IUD6 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
RNF135Q8IUD6 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
RNF135Q8IUD6 AL096828.2-201ENST00000567259 1965 ntBASIC18.4■□□□□ 0.54
RNF135Q8IUD6 AC063926.2-201ENST00000623766 1308 ntBASIC18.4■□□□□ 0.54
RNF135Q8IUD6 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
RNF135Q8IUD6 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
RNF135Q8IUD6 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
RNF135Q8IUD6 EML3-217ENST00000531557 2509 ntTSL 5 BASIC18.4■□□□□ 0.54
RNF135Q8IUD6 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
RNF135Q8IUD6 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
RNF135Q8IUD6 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
RNF135Q8IUD6 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
RNF135Q8IUD6 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
RNF135Q8IUD6 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
RNF135Q8IUD6 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
RNF135Q8IUD6 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
RNF135Q8IUD6 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
RNF135Q8IUD6 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
RNF135Q8IUD6 CD276-203ENST00000537340 2439 ntTSL 2 BASIC18.39■□□□□ 0.53
RNF135Q8IUD6 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC18.39■□□□□ 0.53
RNF135Q8IUD6 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
RNF135Q8IUD6 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
RNF135Q8IUD6 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC18.39■□□□□ 0.53
RNF135Q8IUD6 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
RNF135Q8IUD6 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC18.39■□□□□ 0.53
RNF135Q8IUD6 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC18.39■□□□□ 0.53
RNF135Q8IUD6 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC18.39■□□□□ 0.53
RNF135Q8IUD6 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
RNF135Q8IUD6 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
RNF135Q8IUD6 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC18.39■□□□□ 0.53
RNF135Q8IUD6 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
RNF135Q8IUD6 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC18.39■□□□□ 0.53
RNF135Q8IUD6 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC18.39■□□□□ 0.53
RNF135Q8IUD6 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
RNF135Q8IUD6 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
RNF135Q8IUD6 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
RNF135Q8IUD6 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC18.39■□□□□ 0.53
RNF135Q8IUD6 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
RNF135Q8IUD6 SP100-208ENST00000427101 1922 ntTSL 2 BASIC18.39■□□□□ 0.53
RNF135Q8IUD6 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC18.39■□□□□ 0.53
RNF135Q8IUD6 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC18.39■□□□□ 0.53
RNF135Q8IUD6 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
RNF135Q8IUD6 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
RNF135Q8IUD6 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RNF135Q8IUD6 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
RNF135Q8IUD6 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RNF135Q8IUD6 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC18.38■□□□□ 0.53
RNF135Q8IUD6 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC18.38■□□□□ 0.53
RNF135Q8IUD6 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RNF135Q8IUD6 HR-201ENST00000312841 5351 ntTSL 5 BASIC18.38■□□□□ 0.53
RNF135Q8IUD6 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
RNF135Q8IUD6 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC18.38■□□□□ 0.53
RNF135Q8IUD6 FLYWCH1P1-201ENST00000460917 1874 ntBASIC18.38■□□□□ 0.53
RNF135Q8IUD6 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RNF135Q8IUD6 AC007967.3-201ENST00000434308 558 ntBASIC18.38■□□□□ 0.53
RNF135Q8IUD6 AC069262.1-201ENST00000539058 672 ntBASIC18.38■□□□□ 0.53
RNF135Q8IUD6 AL589182.2-201ENST00000619332 1049 ntBASIC18.38■□□□□ 0.53
RNF135Q8IUD6 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
RNF135Q8IUD6 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
RNF135Q8IUD6 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC18.38■□□□□ 0.53
RNF135Q8IUD6 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
RNF135Q8IUD6 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RNF135Q8IUD6 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC18.38■□□□□ 0.53
RNF135Q8IUD6 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC18.38■□□□□ 0.53
RNF135Q8IUD6 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
RNF135Q8IUD6 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
RNF135Q8IUD6 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
RNF135Q8IUD6 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC18.38■□□□□ 0.53
RNF135Q8IUD6 AC132938.6-201ENST00000623828 1655 ntBASIC18.38■□□□□ 0.53
RNF135Q8IUD6 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
RNF135Q8IUD6 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RNF135Q8IUD6 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC18.37■□□□□ 0.53
RNF135Q8IUD6 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RNF135Q8IUD6 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RNF135Q8IUD6 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
RNF135Q8IUD6 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
RNF135Q8IUD6 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
RNF135Q8IUD6 AC015922.1-201ENST00000421102 1152 ntBASIC18.37■□□□□ 0.53
RNF135Q8IUD6 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC18.37■□□□□ 0.53
RNF135Q8IUD6 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
RNF135Q8IUD6 ACTG1P14-201ENST00000446382 1122 ntBASIC18.37■□□□□ 0.53
RNF135Q8IUD6 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC18.37■□□□□ 0.53
RNF135Q8IUD6 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC18.37■□□□□ 0.53
RNF135Q8IUD6 PDPK2P-202ENST00000562415 1191 ntBASIC18.37■□□□□ 0.53
RNF135Q8IUD6 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC18.37■□□□□ 0.53
RNF135Q8IUD6 AC004835.2-201ENST00000603762 682 ntBASIC18.37■□□□□ 0.53
RNF135Q8IUD6 AC004706.3-202ENST00000621574 984 ntBASIC18.37■□□□□ 0.53
RNF135Q8IUD6 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms