Protein–RNA interactions for Protein: Q86VH4

LRRTM4, Leucine-rich repeat transmembrane neuronal protein 4, humanhuman

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM4Q86VH4 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
LRRTM4Q86VH4 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC17.03■□□□□ 0.32
LRRTM4Q86VH4 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
LRRTM4Q86VH4 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
LRRTM4Q86VH4 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
LRRTM4Q86VH4 PKD1P1-201ENST00000458669 6805 ntBASIC17.03■□□□□ 0.32
LRRTM4Q86VH4 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
LRRTM4Q86VH4 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
LRRTM4Q86VH4 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
LRRTM4Q86VH4 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
LRRTM4Q86VH4 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
LRRTM4Q86VH4 AC006504.4-201ENST00000592118 1568 ntBASIC17.02■□□□□ 0.32
LRRTM4Q86VH4 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
LRRTM4Q86VH4 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC17.02■□□□□ 0.32
LRRTM4Q86VH4 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC17.02■□□□□ 0.32
LRRTM4Q86VH4 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.32
LRRTM4Q86VH4 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
LRRTM4Q86VH4 TEX30-205ENST00000376029 959 ntTSL 2 BASIC17.02■□□□□ 0.32
LRRTM4Q86VH4 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC17.02■□□□□ 0.32
LRRTM4Q86VH4 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC17.02■□□□□ 0.32
LRRTM4Q86VH4 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC17.02■□□□□ 0.32
LRRTM4Q86VH4 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC17.02■□□□□ 0.32
LRRTM4Q86VH4 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC17.02■□□□□ 0.32
LRRTM4Q86VH4 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
LRRTM4Q86VH4 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
LRRTM4Q86VH4 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC17.02■□□□□ 0.31
LRRTM4Q86VH4 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC17.02■□□□□ 0.31
LRRTM4Q86VH4 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC17.02■□□□□ 0.31
LRRTM4Q86VH4 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
LRRTM4Q86VH4 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
LRRTM4Q86VH4 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC17.02■□□□□ 0.31
LRRTM4Q86VH4 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
LRRTM4Q86VH4 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC17.01■□□□□ 0.31
LRRTM4Q86VH4 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
LRRTM4Q86VH4 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
LRRTM4Q86VH4 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC17.01■□□□□ 0.31
LRRTM4Q86VH4 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
LRRTM4Q86VH4 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
LRRTM4Q86VH4 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
LRRTM4Q86VH4 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
LRRTM4Q86VH4 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
LRRTM4Q86VH4 GPR89P-201ENST00000407924 1495 ntBASIC17.01■□□□□ 0.31
LRRTM4Q86VH4 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
LRRTM4Q86VH4 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
LRRTM4Q86VH4 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
LRRTM4Q86VH4 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
LRRTM4Q86VH4 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC17.01■□□□□ 0.31
LRRTM4Q86VH4 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC17.01■□□□□ 0.31
LRRTM4Q86VH4 AL022342.1-201ENST00000400363 863 ntBASIC17.01■□□□□ 0.31
LRRTM4Q86VH4 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC17.01■□□□□ 0.31
LRRTM4Q86VH4 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC17.01■□□□□ 0.31
LRRTM4Q86VH4 IGHV3-22-201ENST00000520721 359 ntBASIC17.01■□□□□ 0.31
LRRTM4Q86VH4 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC17.01■□□□□ 0.31
LRRTM4Q86VH4 WDR88-203ENST00000592765 651 ntTSL 5 BASIC17.01■□□□□ 0.31
LRRTM4Q86VH4 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
LRRTM4Q86VH4 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
LRRTM4Q86VH4 AC117500.6-201ENST00000624871 588 ntBASIC17.01■□□□□ 0.31
LRRTM4Q86VH4 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
LRRTM4Q86VH4 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
LRRTM4Q86VH4 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC17.01■□□□□ 0.31
LRRTM4Q86VH4 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC17.01■□□□□ 0.31
LRRTM4Q86VH4 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
LRRTM4Q86VH4 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
LRRTM4Q86VH4 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
LRRTM4Q86VH4 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
LRRTM4Q86VH4 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
LRRTM4Q86VH4 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
LRRTM4Q86VH4 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC17■□□□□ 0.31
LRRTM4Q86VH4 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
LRRTM4Q86VH4 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC17■□□□□ 0.31
LRRTM4Q86VH4 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
LRRTM4Q86VH4 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
LRRTM4Q86VH4 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
LRRTM4Q86VH4 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
LRRTM4Q86VH4 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
LRRTM4Q86VH4 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
LRRTM4Q86VH4 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
LRRTM4Q86VH4 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
LRRTM4Q86VH4 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
LRRTM4Q86VH4 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC17■□□□□ 0.31
LRRTM4Q86VH4 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC17■□□□□ 0.31
LRRTM4Q86VH4 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC17■□□□□ 0.31
LRRTM4Q86VH4 AC016396.2-201ENST00000562575 1417 ntBASIC17■□□□□ 0.31
LRRTM4Q86VH4 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
LRRTM4Q86VH4 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC17■□□□□ 0.31
LRRTM4Q86VH4 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC17■□□□□ 0.31
LRRTM4Q86VH4 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
LRRTM4Q86VH4 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC17■□□□□ 0.31
LRRTM4Q86VH4 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC17■□□□□ 0.31
LRRTM4Q86VH4 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC17■□□□□ 0.31
LRRTM4Q86VH4 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC17■□□□□ 0.31
LRRTM4Q86VH4 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
LRRTM4Q86VH4 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC17■□□□□ 0.31
LRRTM4Q86VH4 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
LRRTM4Q86VH4 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC17■□□□□ 0.31
LRRTM4Q86VH4 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
LRRTM4Q86VH4 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC17■□□□□ 0.31
LRRTM4Q86VH4 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC16.99■□□□□ 0.31
LRRTM4Q86VH4 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
LRRTM4Q86VH4 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 81.4 ms