Protein–RNA interactions for Protein: Q71RC2

LARP4, La-related protein 4, humanhuman

Known RBP eCLIP

Length 724 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LARP4Q71RC2 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.793e-8■□□□□ 9.2
LARP4Q71RC2 SLC39A5-208ENST00000447080 380 ntTSL 518.98■□□□□ 0.633e-8■□□□□ 9.2
LARP4Q71RC2 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.493e-8■□□□□ 9.2
LARP4Q71RC2 SLC39A5-203ENST00000419232 833 ntTSL 318.09■□□□□ 0.493e-8■□□□□ 9.2
LARP4Q71RC2 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.231e-7■□□□□ 9.2
LARP4Q71RC2 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC20.76■□□□□ 0.913e-10■□□□□ 9.2
LARP4Q71RC2 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC15.12■□□□□ 0.013e-10■□□□□ 9.2
LARP4Q71RC2 PYCR1-213ENST00000584848 949 ntTSL 513.61□□□□□ -0.233e-10■□□□□ 9.2
LARP4Q71RC2 TSPYL1-201ENST00000368608 3326 ntAPPRIS P1 BASIC11.96□□□□□ -0.53e-11■□□□□ 9.2
LARP4Q71RC2 TPI1-208ENST00000495834 820 ntTSL 210.59□□□□□ -0.713e-11■□□□□ 9.2
LARP4Q71RC2 TPI1-207ENST00000493987 839 ntTSL 310.28□□□□□ -0.763e-11■□□□□ 9.2
LARP4Q71RC2 TPI1-203ENST00000462761 374 ntTSL 310.22□□□□□ -0.773e-11■□□□□ 9.2
LARP4Q71RC2 SRP68-211ENST00000592704 1941 ntTSL 225.27■■□□□ 1.642e-7■□□□□ 9.2
LARP4Q71RC2 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC22.43■■□□□ 1.181e-9■□□□□ 9.2
LARP4Q71RC2 MPZL1-205ENST00000448405 1596 ntTSL 1 (best)22.15■■□□□ 1.146e-6■□□□□ 9.2
LARP4Q71RC2 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.676e-6■□□□□ 9.2
LARP4Q71RC2 NBPF1-205ENST00000449853 2755 ntTSL 1 (best)18.45■□□□□ 0.546e-6■□□□□ 9.2
LARP4Q71RC2 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.471e-6■□□□□ 9.2
LARP4Q71RC2 NBPF1-206ENST00000599069 2752 ntTSL 1 (best)17.92■□□□□ 0.466e-6■□□□□ 9.2
LARP4Q71RC2 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.453e-8■□□□□ 9.2
LARP4Q71RC2 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.421e-9■□□□□ 9.2
LARP4Q71RC2 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.41e-9■□□□□ 9.2
LARP4Q71RC2 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.362e-7■□□□□ 9.2
LARP4Q71RC2 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.313e-8■□□□□ 9.2
LARP4Q71RC2 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.153e-8■□□□□ 9.2
LARP4Q71RC2 DNAJC8-205ENST00000489277 1600 ntTSL 1 (best)15.29■□□□□ 0.041e-6■□□□□ 9.2
LARP4Q71RC2 MPZL1-203ENST00000392121 3421 ntTSL 2 BASIC14.74□□□□□ -0.056e-6■□□□□ 9.2
LARP4Q71RC2 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC14.34□□□□□ -0.112e-7■□□□□ 9.2
LARP4Q71RC2 PUF60-209ENST00000527197 1559 ntTSL 5 BASIC14.26□□□□□ -0.132e-18■□□□□ 9.2
LARP4Q71RC2 SPCS3-201ENST00000503362 4571 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.332e-7■□□□□ 9.2
LARP4Q71RC2 NOMO1-204ENST00000566823 1898 ntTSL 212.84□□□□□ -0.353e-8■□□□□ 9.2
LARP4Q71RC2 MID1IP1-204ENST00000614558 3781 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.411e-9■□□□□ 9.2
LARP4Q71RC2 NBPF1-203ENST00000430580 5932 ntAPPRIS P5 TSL 5 BASIC12.41□□□□□ -0.426e-6■□□□□ 9.2
LARP4Q71RC2 NBPF1-204ENST00000432949 4176 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.476e-6■□□□□ 9.2
LARP4Q71RC2 ABHD4-204ENST00000489928 507 ntTSL 311.62□□□□□ -0.556e-6■□□□□ 9.2
LARP4Q71RC2 TMC6-215ENST00000590494 702 ntTSL 210.9□□□□□ -0.666e-6■□□□□ 9.2
LARP4Q71RC2 NOMO1-202ENST00000565655 666 ntTSL 310.07□□□□□ -0.83e-8■□□□□ 9.2
LARP4Q71RC2 ABHD4-203ENST00000428304 3366 ntAPPRIS P1 TSL 1 (best) BASIC8.16□□□□□ -1.16e-6■□□□□ 9.2
LARP4Q71RC2 NDUFAF2-202ENST00000502658 461 ntTSL 1 (best)7.74□□□□□ -1.172e-7■□□□□ 9.2
LARP4Q71RC2 MPZL1-202ENST00000367853 881 ntTSL 1 (best)7.54□□□□□ -1.26e-6■□□□□ 9.2
LARP4Q71RC2 DNAJC8-206ENST00000603289 483 ntTSL 57.51□□□□□ -1.216e-6■□□□□ 9.2
LARP4Q71RC2 MPZL1-208ENST00000474729 1335 ntTSL 1 (best)6.93□□□□□ -1.36e-6■□□□□ 9.2
LARP4Q71RC2 NDUFAF2-204ENST00000512623 696 ntTSL 36.24□□□□□ -1.412e-7■□□□□ 9.2
LARP4Q71RC2 MPZL1-211ENST00000498279 534 ntTSL 46□□□□□ -1.456e-6■□□□□ 9.2
LARP4Q71RC2 MPZL1-204ENST00000403379 961 ntTSL 55.7□□□□□ -1.56e-6■□□□□ 9.2
LARP4Q71RC2 C14orf119-202ENST00000554203 725 ntAPPRIS P1 TSL 2 BASIC6.59□□□□□ -1.356e-11■□□□□ 9.2
LARP4Q71RC2 NDUFB8-209ENST00000531418 585 ntTSL 315.85■□□□□ 0.132e-7■□□□□ 9.2
LARP4Q71RC2 NDUFB8-207ENST00000529437 602 ntTSL 215.32■□□□□ 0.042e-7■□□□□ 9.2
LARP4Q71RC2 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC14.05□□□□□ -0.162e-7■□□□□ 9.2
LARP4Q71RC2 NDUFB8-205ENST00000466088 829 ntTSL 214.03□□□□□ -0.162e-7■□□□□ 9.2
LARP4Q71RC2 NDUFB8-206ENST00000528425 608 ntTSL 413.96□□□□□ -0.172e-7■□□□□ 9.2
LARP4Q71RC2 SLC25A39-205ENST00000585636 561 ntTSL 220.87■□□□□ 0.936e-9■□□□□ 9.2
LARP4Q71RC2 SLC25A39-206ENST00000585695 1121 ntTSL 220.87■□□□□ 0.936e-9■□□□□ 9.2
LARP4Q71RC2 SLC25A39-216ENST00000592857 837 ntTSL 319.34■□□□□ 0.696e-9■□□□□ 9.2
LARP4Q71RC2 SLC25A39-204ENST00000585523 574 ntTSL 417.86■□□□□ 0.456e-9■□□□□ 9.2
LARP4Q71RC2 SLC25A39-209ENST00000588049 839 ntTSL 517.86■□□□□ 0.456e-9■□□□□ 9.2
LARP4Q71RC2 SLC25A39-208ENST00000586633 566 ntTSL 315.92■□□□□ 0.146e-9■□□□□ 9.2
LARP4Q71RC2 SLC25A39-214ENST00000591151 636 ntTSL 213□□□□□ -0.336e-9■□□□□ 9.2
LARP4Q71RC2 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC16.8■□□□□ 0.289e-10■□□□□ 9.2
LARP4Q71RC2 CLDN4-203ENST00000435050 4163 ntAPPRIS P1 TSL 2 BASIC11.94□□□□□ -0.59e-10■□□□□ 9.2
LARP4Q71RC2 CLDN4-202ENST00000431918 4108 ntAPPRIS P1 TSL 2 BASIC11.22□□□□□ -0.619e-10■□□□□ 9.2
LARP4Q71RC2 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.578e-14■□□□□ 9.2
LARP4Q71RC2 PSMB2-201ENST00000373237 2701 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.64e-7■□□□□ 9.2
LARP4Q71RC2 PSMB2-203ENST00000630477 1127 ntTSL 1 (best)9.57□□□□□ -0.884e-7■□□□□ 9.2
LARP4Q71RC2 PSMB2-202ENST00000621781 4217 ntTSL 1 (best) BASIC6.69□□□□□ -1.344e-7■□□□□ 9.2
LARP4Q71RC2 UBR4-203ENST00000375225 1533 ntTSL 2 BASIC12.18□□□□□ -0.465e-14■□□□□ 9.2
LARP4Q71RC2 AL137127.1-201ENST00000606379 3402 ntBASIC10.52□□□□□ -0.735e-14■□□□□ 9.2
LARP4Q71RC2 UBR4-208ENST00000459947 3873 ntTSL 29.92□□□□□ -0.825e-14■□□□□ 9.2
LARP4Q71RC2 UBR4-202ENST00000375224 3475 ntTSL 2 BASIC8.12□□□□□ -1.115e-14■□□□□ 9.2
LARP4Q71RC2 UBR4-214ENST00000486515 536 ntTSL 36.6□□□□□ -1.355e-14■□□□□ 9.2
LARP4Q71RC2 UBR4-204ENST00000375254 15906 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.385e-14■□□□□ 9.2
LARP4Q71RC2 RPL10A-205ENST00000490335 632 ntTSL 215.09■□□□□ 0.011e-30■□□□□ 9.2
LARP4Q71RC2 STMN1-202ENST00000374291 867 ntAPPRIS P1 TSL 2 BASIC6.52□□□□□ -1.374e-25■□□□□ 9.2
LARP4Q71RC2 RPL11-205ENST00000482370 879 ntTSL 1 (best)8.16□□□□□ -1.13e-21■□□□□ 9.2
LARP4Q71RC2 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC18.71■□□□□ 0.591e-7■□□□□ 9.2
LARP4Q71RC2 CCT3-211ENST00000472765 1858 ntTSL 2 BASIC13.29□□□□□ -0.284e-6■□□□□ 9.2
LARP4Q71RC2 EMC1-201ENST00000375199 5408 ntAPPRIS ALT1 TSL 1 (best) BASIC10.75□□□□□ -0.693e-11■□□□□ 9.2
LARP4Q71RC2 EMC1-203ENST00000461353 2175 ntTSL 210.66□□□□□ -0.73e-11■□□□□ 9.2
LARP4Q71RC2 EMC1-207ENST00000477853 6664 ntAPPRIS P3 TSL 1 (best) BASIC10.05□□□□□ -0.83e-11■□□□□ 9.2
LARP4Q71RC2 EMC1-202ENST00000375208 4084 ntTSL 2 BASIC9.06□□□□□ -0.963e-11■□□□□ 9.2
LARP4Q71RC2 EMC1-208ENST00000480380 3892 ntTSL 27.83□□□□□ -1.163e-11■□□□□ 9.2
LARP4Q71RC2 CDH2-201ENST00000269141 4332 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.722e-7■□□□□ 9.2
LARP4Q71RC2 DHRS2-203ENST00000432832 834 ntTSL 218.77■□□□□ 0.67e-24■□□□□ 9.2
LARP4Q71RC2 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC18.85■□□□□ 0.612e-7■□□□□ 9.1
LARP4Q71RC2 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC17.53■□□□□ 0.42e-7■□□□□ 9.1
LARP4Q71RC2 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.132e-7■□□□□ 9.1
LARP4Q71RC2 SLC25A3-209ENST00000548046 550 ntTSL 412.86□□□□□ -0.352e-7■□□□□ 9.1
LARP4Q71RC2 SLC25A3-213ENST00000550695 756 ntTSL 312.73□□□□□ -0.372e-7■□□□□ 9.1
LARP4Q71RC2 SLC25A3-216ENST00000551917 1359 ntAPPRIS P4 TSL 2 BASIC12.57□□□□□ -0.42e-7■□□□□ 9.1
LARP4Q71RC2 SLC25A3-206ENST00000547534 556 ntTSL 2 BASIC12.47□□□□□ -0.412e-7■□□□□ 9.1
LARP4Q71RC2 SLC25A3-202ENST00000228318 1678 ntAPPRIS P4 TSL 5 BASIC12.38□□□□□ -0.432e-7■□□□□ 9.1
LARP4Q71RC2 SLC25A3-214ENST00000551123 1417 ntTSL 1 (best)11.72□□□□□ -0.532e-7■□□□□ 9.1
LARP4Q71RC2 SLC25A3-212ENST00000549338 1285 ntAPPRIS ALT1 TSL 3 BASIC11.27□□□□□ -0.612e-7■□□□□ 9.1
LARP4Q71RC2 SLC25A3-203ENST00000401722 6087 ntAPPRIS ALT1 TSL 1 (best) BASIC10.91□□□□□ -0.662e-7■□□□□ 9.1
LARP4Q71RC2 SLC25A3-204ENST00000546766 3236 ntTSL 1 (best)10.24□□□□□ -0.772e-7■□□□□ 9.1
LARP4Q71RC2 SLC25A3-208ENST00000547908 893 ntTSL 27.99□□□□□ -1.132e-7■□□□□ 9.1
LARP4Q71RC2 RAD21-201ENST00000297338 3749 ntAPPRIS P1 TSL 1 (best) BASIC9.37□□□□□ -0.911e-8■□□□□ 9.1
LARP4Q71RC2 RPS7-206ENST00000472966 556 ntTSL 1 (best)6.82□□□□□ -1.323e-11■□□□□ 9.1
LARP4Q71RC2 RNF114-208ENST00000625177 580 ntTSL 321.69■■□□□ 1.063e-18■□□□□ 9.1
LARP4Q71RC2 RNF114-203ENST00000622999 2438 ntTSL 221.23■□□□□ 0.993e-18■□□□□ 9.1
Retrieved 100 of 15,922 protein–RNA pairs in 322.8 ms