RNA–Protein interactions for RNA: ENST00000449853.2

NBPF1-205, Transcript of NBPF member 1, humanhuman

TSL 1 (best)

Gene NBPF1, Length 2,755 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NBPF1-205ENST00000449853 NISCHQ9Y2I1 1504 aa34.78■■■■□ 3.16
NBPF1-205ENST00000449853 HRCP23327 699 aa31.23■■■□□ 2.59
NBPF1-205ENST00000449853 SHROOM4Q9ULL8 1493 aa30.73■■■□□ 2.51
NBPF1-205ENST00000449853 SUPT5HO00267 1087 aaKnown RBP30.67■■■□□ 2.5
NBPF1-205ENST00000449853 PCGF6Q9BYE7 350 aa30.58■■■□□ 2.49
NBPF1-205ENST00000449853 PPARGC1BQ86YN6 1023 aaKnown RBP30.57■■■□□ 2.48
NBPF1-205ENST00000449853 MYO15BQ96JP2 1530 aa30.39■■■□□ 2.46
NBPF1-205ENST00000449853 CHIC1Q5VXU3 224 aa30.22■■■□□ 2.43
NBPF1-205ENST00000449853 PELP1Q8IZL8 1130 aaKnown RBP30.22■■■□□ 2.43
NBPF1-205ENST00000449853 DCAF1Q9Y4B6 1507 aa29.79■■■□□ 2.36
NBPF1-205ENST00000449853 TRIM26Q12899 539 aaPredicted RBP29.58■■■□□ 2.33
NBPF1-205ENST00000449853 SCAF1Q9H7N4 1312 aaKnown RBP29.57■■■□□ 2.32
NBPF1-205ENST00000449853 ZCCHC6Q5VYS8 1495 aaKnown RBP29.57■■■□□ 2.32
NBPF1-205ENST00000449853 LOC105371045A0A1W2PR82 267 aa29.53■■■□□ 2.32
NBPF1-205ENST00000449853 CCDC180Q9P1Z9 1646 aa29.4■■■□□ 2.3
NBPF1-205ENST00000449853 ZEB1P37275 1124 aaPredicted RBP29.36■■■□□ 2.29
NBPF1-205ENST00000449853 MYT1Q01538 1121 aa29.06■■■□□ 2.24
NBPF1-205ENST00000449853 DCAF8L2P0C7V8 631 aa28.86■■■□□ 2.21
NBPF1-205ENST00000449853 ACIN1Q9UKV3 1341 aaKnown RBP28.84■■■□□ 2.21
NBPF1-205ENST00000449853 NEUROD1Q13562 356 aa28.75■■■□□ 2.19
NBPF1-205ENST00000449853 GTF3C3Q9Y5Q9 886 aa28.61■■■□□ 2.17
NBPF1-205ENST00000449853 CENPBP07199 599 aaPredicted RBP28.48■■■□□ 2.15
NBPF1-205ENST00000449853 TRIM41Q8WV44 630 aa28.37■■■□□ 2.13
NBPF1-205ENST00000449853 FAM9AQ8IZU1 332 aaPredicted RBP28.36■■■□□ 2.13
NBPF1-205ENST00000449853 DIEXFQ68CQ4 756 aaKnown RBP28.33■■■□□ 2.13
NBPF1-205ENST00000449853 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP28.31■■■□□ 2.12
NBPF1-205ENST00000449853 CCER1Q8TC90 406 aaPredicted RBP28.27■■■□□ 2.12
NBPF1-205ENST00000449853 EHMT2Q96KQ7 1210 aa28.24■■■□□ 2.11
NBPF1-205ENST00000449853 ABCC9O60706 1549 aa28.08■■■□□ 2.09
NBPF1-205ENST00000449853 RSF1Q96T23 1441 aaPredicted RBP27.92■■■□□ 2.06
NBPF1-205ENST00000449853 YTHDC1Q96MU7 727 aaKnown RBP27.87■■■□□ 2.05
NBPF1-205ENST00000449853 RB1CC1Q8TDY2 1594 aa27.78■■■□□ 2.04
NBPF1-205ENST00000449853 ZNF316A6NFI3 1004 aaPredicted RBP27.77■■■□□ 2.04
NBPF1-205ENST00000449853 TTBK1Q5TCY1 1321 aaPredicted RBP27.6■■■□□ 2.01
NBPF1-205ENST00000449853 MIER1Q8N108 512 aa27.59■■■□□ 2.01
NBPF1-205ENST00000449853 SCRIBQ14160 1630 aa27.56■■■□□ 2
NBPF1-205ENST00000449853 WRNQ14191 1432 aaPredicted RBP eCLIP27.38■■□□□ 1.97
NBPF1-205ENST00000449853 SUPT16HQ9Y5B9 1047 aaKnown RBP27.22■■□□□ 1.95
NBPF1-205ENST00000449853 CEP162Q5TB80 1403 aa27.21■■□□□ 1.95
NBPF1-205ENST00000449853 ANP32EQ9BTT0 268 aa27.21■■□□□ 1.95
NBPF1-205ENST00000449853 BCL11AQ9H165 835 aa27.18■■□□□ 1.94
NBPF1-205ENST00000449853 CECR2Q9BXF3 1484 aa27.17■■□□□ 1.94
NBPF1-205ENST00000449853 CLSPNQ9HAW4 1339 aa27.17■■□□□ 1.94
NBPF1-205ENST00000449853 MROH2BQ7Z745 1585 aa27.14■■□□□ 1.94
NBPF1-205ENST00000449853 TSHZ2Q9NRE2 1034 aa27.12■■□□□ 1.93
NBPF1-205ENST00000449853 WIZO95785 1651 aa27.07■■□□□ 1.92
NBPF1-205ENST00000449853 HNRNPUL2Q1KMD3 747 aaKnown RBP27.04■■□□□ 1.92
NBPF1-205ENST00000449853 EIF4G1Q04637 1599 aaKnown RBP27.04■■□□□ 1.92
NBPF1-205ENST00000449853 TNIKQ9UKE5 1360 aa27.03■■□□□ 1.92
NBPF1-205ENST00000449853 CCDC88BA6NC98 1476 aa26.93■■□□□ 1.9
NBPF1-205ENST00000449853 UBTFP17480 764 aaKnown RBP26.91■■□□□ 1.9
NBPF1-205ENST00000449853 CSRNP3Q8WYN3 585 aa26.91■■□□□ 1.9
NBPF1-205ENST00000449853 BAZ1AQ9NRL2 1556 aaPredicted RBP26.89■■□□□ 1.9
NBPF1-205ENST00000449853 SOGA1O94964 1423 aa26.86■■□□□ 1.89
NBPF1-205ENST00000449853 ABCC8Q09428 1581 aa26.84■■□□□ 1.89
NBPF1-205ENST00000449853 NACADO15069 1562 aa26.72■■□□□ 1.87
NBPF1-205ENST00000449853 EEA1Q15075 1411 aa26.68■■□□□ 1.86
NBPF1-205ENST00000449853 RUSC2Q8N2Y8 1516 aa26.67■■□□□ 1.86
NBPF1-205ENST00000449853 GOLGA3Q08378 1498 aa26.65■■□□□ 1.86
NBPF1-205ENST00000449853 BCANQ96GW7 911 aa26.63■■□□□ 1.85
NBPF1-205ENST00000449853 TOP2AP11388 1531 aaKnown RBP26.55■■□□□ 1.84
NBPF1-205ENST00000449853 APLP2Q06481 763 aa26.52■■□□□ 1.84
NBPF1-205ENST00000449853 DHX57Q6P158 1386 aaKnown RBP26.51■■□□□ 1.83
NBPF1-205ENST00000449853 FKBP8Q14318 412 aa26.5■■□□□ 1.83
NBPF1-205ENST00000449853 KCNH8Q96L42 1107 aa26.5■■□□□ 1.83
NBPF1-205ENST00000449853 RBM19Q9Y4C8 960 aaKnown RBP26.48■■□□□ 1.83
NBPF1-205ENST00000449853 SMARCA2P51531 1590 aa26.48■■□□□ 1.83
NBPF1-205ENST00000449853 CLIP1P30622 1438 aa26.47■■□□□ 1.83
NBPF1-205ENST00000449853 VPS8Q8N3P4 1428 aa26.45■■□□□ 1.82
NBPF1-205ENST00000449853 CEP164Q9UPV0 1460 aa26.36■■□□□ 1.81
NBPF1-205ENST00000449853 SMARCA4P51532 1647 aa26.33■■□□□ 1.81
NBPF1-205ENST00000449853 NEFLP07196 543 aa26.27■■□□□ 1.8
NBPF1-205ENST00000449853 RANGAP1P46060 587 aaPredicted RBP26.26■■□□□ 1.79
NBPF1-205ENST00000449853 MSH5O43196 834 aa26.24■■□□□ 1.79
NBPF1-205ENST00000449853 KIF21BO75037 1637 aa26.24■■□□□ 1.79
NBPF1-205ENST00000449853 ITGAEP38570 1179 aa26.24■■□□□ 1.79
NBPF1-205ENST00000449853 BAZ1BQ9UIG0 1483 aaKnown RBP26.12■■□□□ 1.77
NBPF1-205ENST00000449853 DDX10Q13206 875 aaKnown RBP26.11■■□□□ 1.77
NBPF1-205ENST00000449853 RAPGEF2Q9Y4G8 1499 aa26.11■■□□□ 1.77
NBPF1-205ENST00000449853 TRIM52Q96A61 297 aa26.06■■□□□ 1.76
NBPF1-205ENST00000449853 KANK4Q5T7N3 995 aaPredicted RBP26.05■■□□□ 1.76
NBPF1-205ENST00000449853 SYNJ1O43426 1573 aa26.04■■□□□ 1.76
NBPF1-205ENST00000449853 ERICH6Q7L0X2 663 aa26.03■■□□□ 1.76
NBPF1-205ENST00000449853 FANCIQ9NVI1 1328 aa26.02■■□□□ 1.76
NBPF1-205ENST00000449853 PRKCSHP14314 528 aaPredicted RBP26■■□□□ 1.75
NBPF1-205ENST00000449853 RRBP1Q9P2E9 1410 aaKnown RBP25.98■■□□□ 1.75
NBPF1-205ENST00000449853 CUX2O14529 1486 aa25.97■■□□□ 1.75
NBPF1-205ENST00000449853 UNC13AQ9UPW8 1703 aa25.94■■□□□ 1.74
NBPF1-205ENST00000449853 PPP1R15AO75807 674 aaPredicted RBP25.93■■□□□ 1.74
NBPF1-205ENST00000449853 CCER2I3L3R5 266 aa25.9■■□□□ 1.74
NBPF1-205ENST00000449853 CDK11AQ9UQ88 783 aaPredicted RBP25.9■■□□□ 1.74
NBPF1-205ENST00000449853 CCNB3Q8WWL7 1395 aa25.88■■□□□ 1.73
NBPF1-205ENST00000449853 ANP32CO43423 234 aa25.86■■□□□ 1.73
NBPF1-205ENST00000449853 MAPKBP1O60336 1514 aa25.86■■□□□ 1.73
NBPF1-205ENST00000449853 ARAP1Q96P48 1450 aa25.86■■□□□ 1.73
NBPF1-205ENST00000449853 RAB3GAP2Q9H2M9 1393 aa25.84■■□□□ 1.73
NBPF1-205ENST00000449853 MYT1LQ9UL68 1186 aa25.83■■□□□ 1.73
NBPF1-205ENST00000449853 WDR97A6NE52 1622 aa25.82■■□□□ 1.72
NBPF1-205ENST00000449853 DEKP35659 375 aaKnown RBP25.8■■□□□ 1.72
NBPF1-205ENST00000449853 HIRIP3Q9BW71 556 aaPredicted RBP25.8■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms