Protein–RNA interactions for Protein: Q70EL2

USP45, Ubiquitin carboxyl-terminal hydrolase 45, humanhuman

Predictions only

Length 814 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP45Q70EL2 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
USP45Q70EL2 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
USP45Q70EL2 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
USP45Q70EL2 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
USP45Q70EL2 FST-202ENST00000396947 2538 ntTSL 5 BASIC17.4■□□□□ 0.38
USP45Q70EL2 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC17.4■□□□□ 0.38
USP45Q70EL2 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
USP45Q70EL2 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
USP45Q70EL2 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
USP45Q70EL2 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
USP45Q70EL2 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
USP45Q70EL2 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
USP45Q70EL2 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
USP45Q70EL2 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC17.39■□□□□ 0.37
USP45Q70EL2 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
USP45Q70EL2 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
USP45Q70EL2 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
USP45Q70EL2 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
USP45Q70EL2 INIP-202ENST00000374236 874 ntTSL 2 BASIC17.39■□□□□ 0.37
USP45Q70EL2 LINC00982-205ENST00000420957 435 ntBASIC17.39■□□□□ 0.37
USP45Q70EL2 HNRNPDP1-201ENST00000439535 754 ntBASIC17.39■□□□□ 0.37
USP45Q70EL2 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
USP45Q70EL2 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC17.39■□□□□ 0.37
USP45Q70EL2 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC17.39■□□□□ 0.37
USP45Q70EL2 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
USP45Q70EL2 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC17.39■□□□□ 0.37
USP45Q70EL2 AC008735.5-201ENST00000623544 497 ntBASIC17.39■□□□□ 0.37
USP45Q70EL2 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC17.39■□□□□ 0.37
USP45Q70EL2 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
USP45Q70EL2 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
USP45Q70EL2 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC17.39■□□□□ 0.37
USP45Q70EL2 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC17.39■□□□□ 0.37
USP45Q70EL2 TPR-209ENST00000613151 2478 ntTSL 5 BASIC17.39■□□□□ 0.37
USP45Q70EL2 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
USP45Q70EL2 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC17.39■□□□□ 0.37
USP45Q70EL2 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
USP45Q70EL2 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
USP45Q70EL2 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
USP45Q70EL2 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
USP45Q70EL2 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC17.38■□□□□ 0.37
USP45Q70EL2 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
USP45Q70EL2 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC17.38■□□□□ 0.37
USP45Q70EL2 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
USP45Q70EL2 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
USP45Q70EL2 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
USP45Q70EL2 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
USP45Q70EL2 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
USP45Q70EL2 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
USP45Q70EL2 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC17.38■□□□□ 0.37
USP45Q70EL2 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC17.38■□□□□ 0.37
USP45Q70EL2 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC17.38■□□□□ 0.37
USP45Q70EL2 PRKN-208ENST00000610470 531 ntTSL 2 BASIC17.38■□□□□ 0.37
USP45Q70EL2 PRKN-209ENST00000612485 225 ntTSL 5 BASIC17.38■□□□□ 0.37
USP45Q70EL2 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC17.38■□□□□ 0.37
USP45Q70EL2 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
USP45Q70EL2 HLA-A-201ENST00000376802 1334 ntBASIC17.38■□□□□ 0.37
USP45Q70EL2 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC17.38■□□□□ 0.37
USP45Q70EL2 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC17.38■□□□□ 0.37
USP45Q70EL2 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
USP45Q70EL2 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
USP45Q70EL2 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
USP45Q70EL2 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
USP45Q70EL2 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
USP45Q70EL2 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
USP45Q70EL2 BOC-212ENST00000485230 2173 ntTSL 2 BASIC17.38■□□□□ 0.37
USP45Q70EL2 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
USP45Q70EL2 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC17.37■□□□□ 0.37
USP45Q70EL2 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
USP45Q70EL2 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC17.37■□□□□ 0.37
USP45Q70EL2 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC17.37■□□□□ 0.37
USP45Q70EL2 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
USP45Q70EL2 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
USP45Q70EL2 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
USP45Q70EL2 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
USP45Q70EL2 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
USP45Q70EL2 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC17.37■□□□□ 0.37
USP45Q70EL2 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
USP45Q70EL2 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
USP45Q70EL2 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
USP45Q70EL2 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
USP45Q70EL2 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
USP45Q70EL2 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC17.37■□□□□ 0.37
USP45Q70EL2 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
USP45Q70EL2 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC17.37■□□□□ 0.37
USP45Q70EL2 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC17.37■□□□□ 0.37
USP45Q70EL2 AL139424.1-201ENST00000607572 797 ntBASIC17.37■□□□□ 0.37
USP45Q70EL2 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
USP45Q70EL2 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC17.37■□□□□ 0.37
USP45Q70EL2 AC004706.3-202ENST00000621574 984 ntBASIC17.37■□□□□ 0.37
USP45Q70EL2 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC17.37■□□□□ 0.37
USP45Q70EL2 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
USP45Q70EL2 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
USP45Q70EL2 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
USP45Q70EL2 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
USP45Q70EL2 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
USP45Q70EL2 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
USP45Q70EL2 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
USP45Q70EL2 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
USP45Q70EL2 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
USP45Q70EL2 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC17.36■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms