Protein–RNA interactions for Protein: Q6FI13

HIST2H2AA3, Histone H2A type 2-A, humanhuman

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST2H2AA3Q6FI13 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
HIST2H2AA3Q6FI13 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
HIST2H2AA3Q6FI13 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
HIST2H2AA3Q6FI13 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
HIST2H2AA3Q6FI13 FER1L4-210ENST00000615531 5998 ntBASIC16.8■□□□□ 0.28
HIST2H2AA3Q6FI13 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
HIST2H2AA3Q6FI13 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC16.8■□□□□ 0.28
HIST2H2AA3Q6FI13 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC16.8■□□□□ 0.28
HIST2H2AA3Q6FI13 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
HIST2H2AA3Q6FI13 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
HIST2H2AA3Q6FI13 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
HIST2H2AA3Q6FI13 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
HIST2H2AA3Q6FI13 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
HIST2H2AA3Q6FI13 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC16.8■□□□□ 0.28
HIST2H2AA3Q6FI13 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
HIST2H2AA3Q6FI13 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
HIST2H2AA3Q6FI13 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
HIST2H2AA3Q6FI13 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
HIST2H2AA3Q6FI13 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC16.8■□□□□ 0.28
HIST2H2AA3Q6FI13 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
HIST2H2AA3Q6FI13 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
HIST2H2AA3Q6FI13 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC16.8■□□□□ 0.28
HIST2H2AA3Q6FI13 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
HIST2H2AA3Q6FI13 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC16.8■□□□□ 0.28
HIST2H2AA3Q6FI13 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
HIST2H2AA3Q6FI13 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC16.8■□□□□ 0.28
HIST2H2AA3Q6FI13 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
HIST2H2AA3Q6FI13 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC16.8■□□□□ 0.28
HIST2H2AA3Q6FI13 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
HIST2H2AA3Q6FI13 PNN-202ENST00000553331 656 ntTSL 3 BASIC16.8■□□□□ 0.28
HIST2H2AA3Q6FI13 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC16.8■□□□□ 0.28
HIST2H2AA3Q6FI13 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC16.8■□□□□ 0.28
HIST2H2AA3Q6FI13 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
HIST2H2AA3Q6FI13 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC16.8■□□□□ 0.28
HIST2H2AA3Q6FI13 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC16.8■□□□□ 0.28
HIST2H2AA3Q6FI13 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
HIST2H2AA3Q6FI13 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
HIST2H2AA3Q6FI13 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
HIST2H2AA3Q6FI13 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
HIST2H2AA3Q6FI13 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
HIST2H2AA3Q6FI13 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
HIST2H2AA3Q6FI13 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
HIST2H2AA3Q6FI13 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
HIST2H2AA3Q6FI13 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
HIST2H2AA3Q6FI13 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
HIST2H2AA3Q6FI13 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
HIST2H2AA3Q6FI13 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC16.79■□□□□ 0.28
HIST2H2AA3Q6FI13 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC16.79■□□□□ 0.28
HIST2H2AA3Q6FI13 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
HIST2H2AA3Q6FI13 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
HIST2H2AA3Q6FI13 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
HIST2H2AA3Q6FI13 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
HIST2H2AA3Q6FI13 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
HIST2H2AA3Q6FI13 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
HIST2H2AA3Q6FI13 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC16.79■□□□□ 0.28
HIST2H2AA3Q6FI13 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
HIST2H2AA3Q6FI13 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC16.79■□□□□ 0.28
HIST2H2AA3Q6FI13 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC16.79■□□□□ 0.28
HIST2H2AA3Q6FI13 AD001527.2-201ENST00000622994 785 ntBASIC16.79■□□□□ 0.28
HIST2H2AA3Q6FI13 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
HIST2H2AA3Q6FI13 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
HIST2H2AA3Q6FI13 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
HIST2H2AA3Q6FI13 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
HIST2H2AA3Q6FI13 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC16.79■□□□□ 0.28
HIST2H2AA3Q6FI13 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
HIST2H2AA3Q6FI13 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
HIST2H2AA3Q6FI13 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
HIST2H2AA3Q6FI13 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
HIST2H2AA3Q6FI13 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC16.79■□□□□ 0.28
HIST2H2AA3Q6FI13 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
HIST2H2AA3Q6FI13 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
HIST2H2AA3Q6FI13 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
HIST2H2AA3Q6FI13 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC16.79■□□□□ 0.28
HIST2H2AA3Q6FI13 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
HIST2H2AA3Q6FI13 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
HIST2H2AA3Q6FI13 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
HIST2H2AA3Q6FI13 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC16.79■□□□□ 0.28
HIST2H2AA3Q6FI13 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
HIST2H2AA3Q6FI13 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
HIST2H2AA3Q6FI13 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
HIST2H2AA3Q6FI13 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
HIST2H2AA3Q6FI13 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC16.78■□□□□ 0.28
HIST2H2AA3Q6FI13 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
HIST2H2AA3Q6FI13 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
HIST2H2AA3Q6FI13 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
HIST2H2AA3Q6FI13 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
HIST2H2AA3Q6FI13 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
HIST2H2AA3Q6FI13 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
HIST2H2AA3Q6FI13 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
HIST2H2AA3Q6FI13 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC16.78■□□□□ 0.28
HIST2H2AA3Q6FI13 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
HIST2H2AA3Q6FI13 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
HIST2H2AA3Q6FI13 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC16.78■□□□□ 0.28
HIST2H2AA3Q6FI13 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
HIST2H2AA3Q6FI13 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC16.78■□□□□ 0.28
HIST2H2AA3Q6FI13 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
HIST2H2AA3Q6FI13 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
HIST2H2AA3Q6FI13 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
HIST2H2AA3Q6FI13 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
HIST2H2AA3Q6FI13 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms