Protein–RNA interactions for Protein: Q5H8C1

FREM1, FRAS1-related extracellular matrix protein 1, humanhuman

Predictions only

Length 2,179 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM1Q5H8C1 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC15.21■□□□□ 0.03
FREM1Q5H8C1 AC009947.1-201ENST00000444350 727 ntBASIC15.21■□□□□ 0.03
FREM1Q5H8C1 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC15.21■□□□□ 0.03
FREM1Q5H8C1 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
FREM1Q5H8C1 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
FREM1Q5H8C1 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
FREM1Q5H8C1 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC15.21■□□□□ 0.03
FREM1Q5H8C1 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC15.21■□□□□ 0.03
FREM1Q5H8C1 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
FREM1Q5H8C1 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
FREM1Q5H8C1 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
FREM1Q5H8C1 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
FREM1Q5H8C1 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC15.21■□□□□ 0.03
FREM1Q5H8C1 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
FREM1Q5H8C1 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC15.21■□□□□ 0.03
FREM1Q5H8C1 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC15.21■□□□□ 0.03
FREM1Q5H8C1 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC15.21■□□□□ 0.03
FREM1Q5H8C1 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
FREM1Q5H8C1 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
FREM1Q5H8C1 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC15.21■□□□□ 0.02
FREM1Q5H8C1 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.02
FREM1Q5H8C1 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC15.21■□□□□ 0.02
FREM1Q5H8C1 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
FREM1Q5H8C1 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
FREM1Q5H8C1 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC15.21■□□□□ 0.02
FREM1Q5H8C1 AC139530.3-201ENST00000620344 690 ntBASIC15.21■□□□□ 0.02
FREM1Q5H8C1 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.02
FREM1Q5H8C1 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
FREM1Q5H8C1 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
FREM1Q5H8C1 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
FREM1Q5H8C1 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
FREM1Q5H8C1 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
FREM1Q5H8C1 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC15.2■□□□□ 0.02
FREM1Q5H8C1 AC108860.2-201ENST00000562760 2183 ntBASIC15.2■□□□□ 0.02
FREM1Q5H8C1 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC15.2■□□□□ 0.02
FREM1Q5H8C1 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
FREM1Q5H8C1 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
FREM1Q5H8C1 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
FREM1Q5H8C1 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
FREM1Q5H8C1 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
FREM1Q5H8C1 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
FREM1Q5H8C1 AC023274.1-201ENST00000418278 595 ntBASIC15.2■□□□□ 0.02
FREM1Q5H8C1 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC15.2■□□□□ 0.02
FREM1Q5H8C1 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC15.2■□□□□ 0.02
FREM1Q5H8C1 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC15.2■□□□□ 0.02
FREM1Q5H8C1 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC15.2■□□□□ 0.02
FREM1Q5H8C1 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC15.2■□□□□ 0.02
FREM1Q5H8C1 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC15.2■□□□□ 0.02
FREM1Q5H8C1 AL353135.1-201ENST00000606729 504 ntBASIC15.2■□□□□ 0.02
FREM1Q5H8C1 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC15.2■□□□□ 0.02
FREM1Q5H8C1 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC15.2■□□□□ 0.02
FREM1Q5H8C1 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
FREM1Q5H8C1 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
FREM1Q5H8C1 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC15.2■□□□□ 0.02
FREM1Q5H8C1 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC15.2■□□□□ 0.02
FREM1Q5H8C1 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
FREM1Q5H8C1 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
FREM1Q5H8C1 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
FREM1Q5H8C1 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
FREM1Q5H8C1 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
FREM1Q5H8C1 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
FREM1Q5H8C1 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
FREM1Q5H8C1 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC15.2■□□□□ 0.02
FREM1Q5H8C1 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC15.2■□□□□ 0.02
FREM1Q5H8C1 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
FREM1Q5H8C1 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
FREM1Q5H8C1 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
FREM1Q5H8C1 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
FREM1Q5H8C1 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC15.2■□□□□ 0.02
FREM1Q5H8C1 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC15.2■□□□□ 0.02
FREM1Q5H8C1 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC15.19■□□□□ 0.02
FREM1Q5H8C1 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC15.19■□□□□ 0.02
FREM1Q5H8C1 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC15.19■□□□□ 0.02
FREM1Q5H8C1 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC15.19■□□□□ 0.02
FREM1Q5H8C1 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
FREM1Q5H8C1 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC15.19■□□□□ 0.02
FREM1Q5H8C1 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
FREM1Q5H8C1 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
FREM1Q5H8C1 HNRNPRP1-201ENST00000453465 1695 ntBASIC15.19■□□□□ 0.02
FREM1Q5H8C1 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
FREM1Q5H8C1 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC15.19■□□□□ 0.02
FREM1Q5H8C1 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC15.19■□□□□ 0.02
FREM1Q5H8C1 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
FREM1Q5H8C1 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
FREM1Q5H8C1 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
FREM1Q5H8C1 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
FREM1Q5H8C1 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC15.19■□□□□ 0.02
FREM1Q5H8C1 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC15.19■□□□□ 0.02
FREM1Q5H8C1 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC15.19■□□□□ 0.02
FREM1Q5H8C1 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC15.19■□□□□ 0.02
FREM1Q5H8C1 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
FREM1Q5H8C1 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
FREM1Q5H8C1 AP002414.1-201ENST00000391405 1147 ntBASIC15.19■□□□□ 0.02
FREM1Q5H8C1 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
FREM1Q5H8C1 POLD4-207ENST00000531239 584 ntTSL 2 BASIC15.19■□□□□ 0.02
FREM1Q5H8C1 PGM5P2-202ENST00000637225 1043 ntBASIC15.19■□□□□ 0.02
FREM1Q5H8C1 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
FREM1Q5H8C1 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
FREM1Q5H8C1 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
FREM1Q5H8C1 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 54.2 ms