Protein–RNA interactions for Protein: Q567U6

CCDC93, Coiled-coil domain-containing protein 93, humanhuman

Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93Q567U6 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
CCDC93Q567U6 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CCDC93Q567U6 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC21.2■□□□□ 0.98
CCDC93Q567U6 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC21.2■□□□□ 0.98
CCDC93Q567U6 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC21.2■□□□□ 0.98
CCDC93Q567U6 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC21.2■□□□□ 0.98
CCDC93Q567U6 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CCDC93Q567U6 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CCDC93Q567U6 MIR943-201ENST00000401286 94 ntBASIC21.2■□□□□ 0.98
CCDC93Q567U6 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC21.2■□□□□ 0.98
CCDC93Q567U6 SLC25A6P2-201ENST00000497974 877 ntBASIC21.2■□□□□ 0.98
CCDC93Q567U6 AC079140.1-201ENST00000508039 487 ntBASIC21.2■□□□□ 0.98
CCDC93Q567U6 AC005225.4-201ENST00000557330 545 ntBASIC21.2■□□□□ 0.98
CCDC93Q567U6 YTHDF3-AS1-201ENST00000603538 718 ntBASIC21.2■□□□□ 0.98
CCDC93Q567U6 AP001059.3-201ENST00000619053 235 ntBASIC21.2■□□□□ 0.98
CCDC93Q567U6 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC21.2■□□□□ 0.98
CCDC93Q567U6 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC21.2■□□□□ 0.98
CCDC93Q567U6 TUBB3P1-201ENST00000405796 1332 ntBASIC21.2■□□□□ 0.98
CCDC93Q567U6 AC129492.6-201ENST00000611383 1305 ntBASIC21.2■□□□□ 0.98
CCDC93Q567U6 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC21.2■□□□□ 0.98
CCDC93Q567U6 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC21.2■□□□□ 0.98
CCDC93Q567U6 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
CCDC93Q567U6 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
CCDC93Q567U6 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC21.2■□□□□ 0.98
CCDC93Q567U6 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC21.2■□□□□ 0.98
CCDC93Q567U6 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CCDC93Q567U6 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC21.19■□□□□ 0.98
CCDC93Q567U6 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CCDC93Q567U6 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CCDC93Q567U6 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CCDC93Q567U6 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CCDC93Q567U6 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC21.19■□□□□ 0.98
CCDC93Q567U6 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CCDC93Q567U6 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC21.19■□□□□ 0.98
CCDC93Q567U6 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CCDC93Q567U6 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CCDC93Q567U6 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CCDC93Q567U6 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC21.19■□□□□ 0.98
CCDC93Q567U6 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
CCDC93Q567U6 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CCDC93Q567U6 TSPY16P-201ENST00000449843 468 ntBASIC21.19■□□□□ 0.98
CCDC93Q567U6 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
CCDC93Q567U6 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC21.19■□□□□ 0.98
CCDC93Q567U6 HLA-J-202ENST00000469281 1241 ntBASIC21.19■□□□□ 0.98
CCDC93Q567U6 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CCDC93Q567U6 RN7SL204P-201ENST00000582831 262 ntBASIC21.19■□□□□ 0.98
CCDC93Q567U6 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC21.19■□□□□ 0.98
CCDC93Q567U6 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC21.19■□□□□ 0.98
CCDC93Q567U6 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
CCDC93Q567U6 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
CCDC93Q567U6 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
CCDC93Q567U6 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CCDC93Q567U6 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CCDC93Q567U6 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC21.19■□□□□ 0.98
CCDC93Q567U6 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CCDC93Q567U6 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC21.19■□□□□ 0.98
CCDC93Q567U6 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC21.18■□□□□ 0.98
CCDC93Q567U6 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CCDC93Q567U6 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
CCDC93Q567U6 PCDHB18P-201ENST00000524813 2368 ntBASIC21.18■□□□□ 0.98
CCDC93Q567U6 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC21.18■□□□□ 0.98
CCDC93Q567U6 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC21.18■□□□□ 0.98
CCDC93Q567U6 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CCDC93Q567U6 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
CCDC93Q567U6 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
CCDC93Q567U6 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
CCDC93Q567U6 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC21.18■□□□□ 0.98
CCDC93Q567U6 RPL30-202ENST00000396070 440 ntTSL 2 BASIC21.18■□□□□ 0.98
CCDC93Q567U6 CENPM-205ENST00000404067 905 ntTSL 3 BASIC21.18■□□□□ 0.98
CCDC93Q567U6 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC21.18■□□□□ 0.98
CCDC93Q567U6 FAM58DP-201ENST00000428076 619 ntBASIC21.18■□□□□ 0.98
CCDC93Q567U6 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC21.18■□□□□ 0.98
CCDC93Q567U6 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC21.18■□□□□ 0.98
CCDC93Q567U6 KLF2P3-201ENST00000451977 1087 ntBASIC21.18■□□□□ 0.98
CCDC93Q567U6 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
CCDC93Q567U6 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CCDC93Q567U6 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CCDC93Q567U6 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC21.18■□□□□ 0.98
CCDC93Q567U6 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CCDC93Q567U6 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC21.18■□□□□ 0.98
CCDC93Q567U6 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
CCDC93Q567U6 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CCDC93Q567U6 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CCDC93Q567U6 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CCDC93Q567U6 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CCDC93Q567U6 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CCDC93Q567U6 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CCDC93Q567U6 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CCDC93Q567U6 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CCDC93Q567U6 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CCDC93Q567U6 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC21.18■□□□□ 0.98
CCDC93Q567U6 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CCDC93Q567U6 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
CCDC93Q567U6 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CCDC93Q567U6 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CCDC93Q567U6 WAC-202ENST00000347934 2839 ntTSL 5 BASIC21.17■□□□□ 0.98
CCDC93Q567U6 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
CCDC93Q567U6 VMA21-202ENST00000370361 693 ntTSL 5 BASIC21.17■□□□□ 0.98
CCDC93Q567U6 MIR661-201ENST00000384842 89 ntBASIC21.17■□□□□ 0.98
CCDC93Q567U6 TFAMP1-201ENST00000412727 736 ntBASIC21.17■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 66.9 ms