Protein–RNA interactions for Protein: Q495M9

USH1G, Usher syndrome type-1G protein, humanhuman

Predictions only

Length 461 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH1GQ495M9 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC19.9■□□□□ 0.78
USH1GQ495M9 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC19.9■□□□□ 0.78
USH1GQ495M9 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
USH1GQ495M9 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
USH1GQ495M9 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC19.9■□□□□ 0.78
USH1GQ495M9 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
USH1GQ495M9 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
USH1GQ495M9 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
USH1GQ495M9 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
USH1GQ495M9 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC19.89■□□□□ 0.78
USH1GQ495M9 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC19.89■□□□□ 0.78
USH1GQ495M9 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
USH1GQ495M9 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
USH1GQ495M9 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
USH1GQ495M9 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
USH1GQ495M9 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
USH1GQ495M9 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
USH1GQ495M9 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC19.89■□□□□ 0.77
USH1GQ495M9 METTL26-205ENST00000397666 726 ntTSL 2 BASIC19.89■□□□□ 0.77
USH1GQ495M9 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
USH1GQ495M9 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
USH1GQ495M9 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC19.89■□□□□ 0.77
USH1GQ495M9 CRYGEP-201ENST00000412192 528 ntBASIC19.89■□□□□ 0.77
USH1GQ495M9 AC023274.1-201ENST00000418278 595 ntBASIC19.89■□□□□ 0.77
USH1GQ495M9 COX10-202ENST00000429152 875 ntTSL 2 BASIC19.89■□□□□ 0.77
USH1GQ495M9 KRT18P2-201ENST00000447938 1258 ntBASIC19.89■□□□□ 0.77
USH1GQ495M9 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
USH1GQ495M9 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC19.89■□□□□ 0.77
USH1GQ495M9 AL590787.1-201ENST00000568856 1315 ntBASIC19.89■□□□□ 0.77
USH1GQ495M9 GPALPP1-207ENST00000611650 899 ntBASIC19.89■□□□□ 0.77
USH1GQ495M9 AC006538.3-201ENST00000612495 578 ntBASIC19.89■□□□□ 0.77
USH1GQ495M9 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
USH1GQ495M9 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC19.89■□□□□ 0.77
USH1GQ495M9 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
USH1GQ495M9 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
USH1GQ495M9 FZD10-202ENST00000539839 3282 ntBASIC19.89■□□□□ 0.77
USH1GQ495M9 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
USH1GQ495M9 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
USH1GQ495M9 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC19.89■□□□□ 0.77
USH1GQ495M9 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC19.88■□□□□ 0.77
USH1GQ495M9 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
USH1GQ495M9 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC19.88■□□□□ 0.77
USH1GQ495M9 GATB-213ENST00000515812 1893 ntTSL 5 BASIC19.88■□□□□ 0.77
USH1GQ495M9 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
USH1GQ495M9 PI4KAP1-204ENST00000612579 1703 ntBASIC19.88■□□□□ 0.77
USH1GQ495M9 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC19.88■□□□□ 0.77
USH1GQ495M9 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC19.88■□□□□ 0.77
USH1GQ495M9 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
USH1GQ495M9 AP002414.1-201ENST00000391405 1147 ntBASIC19.88■□□□□ 0.77
USH1GQ495M9 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC19.88■□□□□ 0.77
USH1GQ495M9 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC19.88■□□□□ 0.77
USH1GQ495M9 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC19.88■□□□□ 0.77
USH1GQ495M9 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC19.88■□□□□ 0.77
USH1GQ495M9 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC19.88■□□□□ 0.77
USH1GQ495M9 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC19.88■□□□□ 0.77
USH1GQ495M9 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC19.88■□□□□ 0.77
USH1GQ495M9 GNE-204ENST00000539208 2190 ntTSL 2 BASIC19.88■□□□□ 0.77
USH1GQ495M9 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
USH1GQ495M9 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
USH1GQ495M9 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC19.88■□□□□ 0.77
USH1GQ495M9 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC19.88■□□□□ 0.77
USH1GQ495M9 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
USH1GQ495M9 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
USH1GQ495M9 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
USH1GQ495M9 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC19.87■□□□□ 0.77
USH1GQ495M9 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC19.87■□□□□ 0.77
USH1GQ495M9 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC19.87■□□□□ 0.77
USH1GQ495M9 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
USH1GQ495M9 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
USH1GQ495M9 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
USH1GQ495M9 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC19.87■□□□□ 0.77
USH1GQ495M9 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC19.87■□□□□ 0.77
USH1GQ495M9 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
USH1GQ495M9 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
USH1GQ495M9 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
USH1GQ495M9 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
USH1GQ495M9 RIN3-211ENST00000557762 517 ntTSL 3 BASIC19.87■□□□□ 0.77
USH1GQ495M9 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
USH1GQ495M9 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC19.87■□□□□ 0.77
USH1GQ495M9 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
USH1GQ495M9 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
USH1GQ495M9 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
USH1GQ495M9 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
USH1GQ495M9 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
USH1GQ495M9 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
USH1GQ495M9 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC19.87■□□□□ 0.77
USH1GQ495M9 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
USH1GQ495M9 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
USH1GQ495M9 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC19.87■□□□□ 0.77
USH1GQ495M9 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
USH1GQ495M9 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
USH1GQ495M9 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
USH1GQ495M9 AC067852.2-201ENST00000590513 2313 ntBASIC19.86■□□□□ 0.77
USH1GQ495M9 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
USH1GQ495M9 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
USH1GQ495M9 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
USH1GQ495M9 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
USH1GQ495M9 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
USH1GQ495M9 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC19.86■□□□□ 0.77
USH1GQ495M9 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms