Protein–RNA interactions for Protein: Q15768

EFNB3, Ephrin-B3, humanhuman

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB3Q15768 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
EFNB3Q15768 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
EFNB3Q15768 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
EFNB3Q15768 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
EFNB3Q15768 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
EFNB3Q15768 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
EFNB3Q15768 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
EFNB3Q15768 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
EFNB3Q15768 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
EFNB3Q15768 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
EFNB3Q15768 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
EFNB3Q15768 BEX3-201ENST00000361298 921 ntTSL 2 BASIC14.79□□□□□ -0.04
EFNB3Q15768 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
EFNB3Q15768 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC14.79□□□□□ -0.04
EFNB3Q15768 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC14.79□□□□□ -0.04
EFNB3Q15768 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
EFNB3Q15768 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
EFNB3Q15768 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
EFNB3Q15768 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
EFNB3Q15768 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
EFNB3Q15768 RPP21-221ENST00000428040 594 ntTSL 2 BASIC14.79□□□□□ -0.04
EFNB3Q15768 PRSS29P-201ENST00000440800 595 ntBASIC14.79□□□□□ -0.04
EFNB3Q15768 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
EFNB3Q15768 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC14.79□□□□□ -0.04
EFNB3Q15768 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC14.79□□□□□ -0.04
EFNB3Q15768 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC14.79□□□□□ -0.04
EFNB3Q15768 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC14.79□□□□□ -0.04
EFNB3Q15768 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC14.79□□□□□ -0.04
EFNB3Q15768 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC14.79□□□□□ -0.04
EFNB3Q15768 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC14.79□□□□□ -0.04
EFNB3Q15768 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC14.79□□□□□ -0.04
EFNB3Q15768 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC14.79□□□□□ -0.04
EFNB3Q15768 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC14.79□□□□□ -0.04
EFNB3Q15768 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
EFNB3Q15768 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
EFNB3Q15768 GGTLC5P-201ENST00000617623 998 ntBASIC14.79□□□□□ -0.04
EFNB3Q15768 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
EFNB3Q15768 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
EFNB3Q15768 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
EFNB3Q15768 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
EFNB3Q15768 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
EFNB3Q15768 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
EFNB3Q15768 AC008764.6-201ENST00000595909 2069 ntBASIC14.78□□□□□ -0.04
EFNB3Q15768 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC14.78□□□□□ -0.04
EFNB3Q15768 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC14.78□□□□□ -0.04
EFNB3Q15768 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
EFNB3Q15768 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
EFNB3Q15768 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC14.78□□□□□ -0.04
EFNB3Q15768 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC14.78□□□□□ -0.04
EFNB3Q15768 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC14.78□□□□□ -0.04
EFNB3Q15768 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
EFNB3Q15768 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC14.78□□□□□ -0.04
EFNB3Q15768 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC14.78□□□□□ -0.04
EFNB3Q15768 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
EFNB3Q15768 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
EFNB3Q15768 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
EFNB3Q15768 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
EFNB3Q15768 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
EFNB3Q15768 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
EFNB3Q15768 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
EFNB3Q15768 KRT18P13-201ENST00000400056 1290 ntBASIC14.78□□□□□ -0.04
EFNB3Q15768 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
EFNB3Q15768 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
EFNB3Q15768 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC14.78□□□□□ -0.04
EFNB3Q15768 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
EFNB3Q15768 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC14.78□□□□□ -0.04
EFNB3Q15768 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC14.78□□□□□ -0.04
EFNB3Q15768 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC14.78□□□□□ -0.04
EFNB3Q15768 AC040169.1-201ENST00000565382 521 ntBASIC14.78□□□□□ -0.04
EFNB3Q15768 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC14.78□□□□□ -0.04
EFNB3Q15768 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC14.78□□□□□ -0.04
EFNB3Q15768 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
EFNB3Q15768 TK1-204ENST00000590430 683 ntTSL 3 BASIC14.78□□□□□ -0.04
EFNB3Q15768 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
EFNB3Q15768 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC14.78□□□□□ -0.04
EFNB3Q15768 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
EFNB3Q15768 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
EFNB3Q15768 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC14.78□□□□□ -0.04
EFNB3Q15768 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
EFNB3Q15768 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
EFNB3Q15768 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
EFNB3Q15768 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
EFNB3Q15768 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
EFNB3Q15768 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC14.78□□□□□ -0.04
EFNB3Q15768 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC14.78□□□□□ -0.04
EFNB3Q15768 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
EFNB3Q15768 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC14.78□□□□□ -0.04
EFNB3Q15768 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
EFNB3Q15768 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC14.78□□□□□ -0.04
EFNB3Q15768 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
EFNB3Q15768 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC14.77□□□□□ -0.04
EFNB3Q15768 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
EFNB3Q15768 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC14.77□□□□□ -0.04
EFNB3Q15768 AL135999.2-201ENST00000622438 1686 ntBASIC14.77□□□□□ -0.04
EFNB3Q15768 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC14.77□□□□□ -0.04
EFNB3Q15768 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC14.77□□□□□ -0.04
EFNB3Q15768 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
EFNB3Q15768 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
EFNB3Q15768 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
EFNB3Q15768 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms