Protein–RNA interactions for Protein: Q04837

SSBP1, Single-stranded DNA-binding protein, mitochondrial, humanhuman

Known RBP Predictions only

Length 148 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1Q04837 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
SSBP1Q04837 AC010653.2-201ENST00000623505 997 ntBASIC14.7□□□□□ -0.06
SSBP1Q04837 AC116562.4-202ENST00000641738 218 ntBASIC14.7□□□□□ -0.06
SSBP1Q04837 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
SSBP1Q04837 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC14.7□□□□□ -0.06
SSBP1Q04837 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC14.7□□□□□ -0.06
SSBP1Q04837 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC14.7□□□□□ -0.06
SSBP1Q04837 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
SSBP1Q04837 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
SSBP1Q04837 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
SSBP1Q04837 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC14.7□□□□□ -0.06
SSBP1Q04837 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
SSBP1Q04837 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
SSBP1Q04837 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
SSBP1Q04837 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
SSBP1Q04837 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
SSBP1Q04837 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
SSBP1Q04837 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
SSBP1Q04837 AC008741.2-201ENST00000612792 3115 ntBASIC14.7□□□□□ -0.06
SSBP1Q04837 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
SSBP1Q04837 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
SSBP1Q04837 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
SSBP1Q04837 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC14.69□□□□□ -0.06
SSBP1Q04837 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
SSBP1Q04837 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
SSBP1Q04837 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
SSBP1Q04837 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
SSBP1Q04837 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
SSBP1Q04837 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
SSBP1Q04837 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC14.69□□□□□ -0.06
SSBP1Q04837 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC14.69□□□□□ -0.06
SSBP1Q04837 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC14.69□□□□□ -0.06
SSBP1Q04837 HIST1H2APS4-201ENST00000362070 348 ntBASIC14.69□□□□□ -0.06
SSBP1Q04837 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
SSBP1Q04837 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC14.69□□□□□ -0.06
SSBP1Q04837 AC096633.1-201ENST00000422446 749 ntBASIC14.69□□□□□ -0.06
SSBP1Q04837 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
SSBP1Q04837 RPPH1-201ENST00000516869 333 ntBASIC14.69□□□□□ -0.06
SSBP1Q04837 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC14.69□□□□□ -0.06
SSBP1Q04837 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC14.69□□□□□ -0.06
SSBP1Q04837 GRAP-204ENST00000573099 846 ntTSL 3 BASIC14.69□□□□□ -0.06
SSBP1Q04837 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC14.69□□□□□ -0.06
SSBP1Q04837 AC024243.1-201ENST00000609234 778 ntBASIC14.69□□□□□ -0.06
SSBP1Q04837 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC14.69□□□□□ -0.06
SSBP1Q04837 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC14.69□□□□□ -0.06
SSBP1Q04837 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
SSBP1Q04837 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC14.69□□□□□ -0.06
SSBP1Q04837 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC14.69□□□□□ -0.06
SSBP1Q04837 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
SSBP1Q04837 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
SSBP1Q04837 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
SSBP1Q04837 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
SSBP1Q04837 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC14.69□□□□□ -0.06
SSBP1Q04837 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
SSBP1Q04837 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
SSBP1Q04837 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
SSBP1Q04837 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
SSBP1Q04837 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC14.69□□□□□ -0.06
SSBP1Q04837 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
SSBP1Q04837 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
SSBP1Q04837 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC14.69□□□□□ -0.06
SSBP1Q04837 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC14.69□□□□□ -0.06
SSBP1Q04837 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
SSBP1Q04837 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC14.68□□□□□ -0.06
SSBP1Q04837 STX3-203ENST00000529177 1571 ntTSL 2 BASIC14.68□□□□□ -0.06
SSBP1Q04837 AC006538.1-201ENST00000567905 1585 ntBASIC14.68□□□□□ -0.06
SSBP1Q04837 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
SSBP1Q04837 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
SSBP1Q04837 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SSBP1Q04837 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
SSBP1Q04837 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
SSBP1Q04837 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SSBP1Q04837 CES3-203ENST00000543856 3178 ntTSL 2 BASIC14.68□□□□□ -0.06
SSBP1Q04837 HLA-A-202ENST00000376806 1854 ntBASIC14.68□□□□□ -0.06
SSBP1Q04837 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC14.68□□□□□ -0.06
SSBP1Q04837 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SSBP1Q04837 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SSBP1Q04837 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
SSBP1Q04837 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
SSBP1Q04837 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC14.68□□□□□ -0.06
SSBP1Q04837 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
SSBP1Q04837 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
SSBP1Q04837 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
SSBP1Q04837 AC024563.2-201ENST00000603282 481 ntBASIC14.68□□□□□ -0.06
SSBP1Q04837 AC006058.3-201ENST00000606217 1069 ntBASIC14.68□□□□□ -0.06
SSBP1Q04837 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC14.68□□□□□ -0.06
SSBP1Q04837 REXO1L10P-201ENST00000615707 1290 ntBASIC14.68□□□□□ -0.06
SSBP1Q04837 REXO1L12P-201ENST00000622156 912 ntBASIC14.68□□□□□ -0.06
SSBP1Q04837 DECR2-212ENST00000627716 352 ntTSL 2 BASIC14.68□□□□□ -0.06
SSBP1Q04837 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SSBP1Q04837 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC14.68□□□□□ -0.06
SSBP1Q04837 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC14.68□□□□□ -0.06
SSBP1Q04837 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SSBP1Q04837 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SSBP1Q04837 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SSBP1Q04837 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
SSBP1Q04837 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC14.68□□□□□ -0.06
SSBP1Q04837 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
SSBP1Q04837 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
SSBP1Q04837 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms