Protein–RNA interactions for Protein: P78406

RAE1, mRNA export factor, humanhuman

Known RBP Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1P78406 AC093458.2-201ENST00000623150 629 ntBASIC16.46■□□□□ 0.23
RAE1P78406 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC16.46■□□□□ 0.23
RAE1P78406 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
RAE1P78406 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
RAE1P78406 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
RAE1P78406 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
RAE1P78406 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
RAE1P78406 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC16.46■□□□□ 0.23
RAE1P78406 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC16.46■□□□□ 0.23
RAE1P78406 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC16.46■□□□□ 0.23
RAE1P78406 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
RAE1P78406 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC16.46■□□□□ 0.22
RAE1P78406 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
RAE1P78406 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
RAE1P78406 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
RAE1P78406 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
RAE1P78406 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
RAE1P78406 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
RAE1P78406 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC16.45■□□□□ 0.22
RAE1P78406 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC16.45■□□□□ 0.22
RAE1P78406 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
RAE1P78406 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
RAE1P78406 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RAE1P78406 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RAE1P78406 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
RAE1P78406 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC16.45■□□□□ 0.22
RAE1P78406 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
RAE1P78406 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RAE1P78406 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC16.45■□□□□ 0.22
RAE1P78406 SPDYE21P-201ENST00000413323 827 ntBASIC16.45■□□□□ 0.22
RAE1P78406 NUS1P2-201ENST00000417358 873 ntBASIC16.45■□□□□ 0.22
RAE1P78406 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
RAE1P78406 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC16.45■□□□□ 0.22
RAE1P78406 FICD-205ENST00000552758 603 ntTSL 2 BASIC16.45■□□□□ 0.22
RAE1P78406 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC16.45■□□□□ 0.22
RAE1P78406 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC16.45■□□□□ 0.22
RAE1P78406 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC16.45■□□□□ 0.22
RAE1P78406 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC16.45■□□□□ 0.22
RAE1P78406 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC16.45■□□□□ 0.22
RAE1P78406 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RAE1P78406 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
RAE1P78406 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC16.45■□□□□ 0.22
RAE1P78406 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
RAE1P78406 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
RAE1P78406 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
RAE1P78406 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC16.45■□□□□ 0.22
RAE1P78406 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC16.45■□□□□ 0.22
RAE1P78406 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
RAE1P78406 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
RAE1P78406 FRMD8P1-201ENST00000440433 1524 ntBASIC16.45■□□□□ 0.22
RAE1P78406 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
RAE1P78406 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
RAE1P78406 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
RAE1P78406 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RAE1P78406 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
RAE1P78406 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC16.44■□□□□ 0.22
RAE1P78406 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
RAE1P78406 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC16.44■□□□□ 0.22
RAE1P78406 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
RAE1P78406 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
RAE1P78406 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC16.44■□□□□ 0.22
RAE1P78406 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
RAE1P78406 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RAE1P78406 MED16-201ENST00000269814 1199 ntTSL 5 BASIC16.44■□□□□ 0.22
RAE1P78406 SOD2-201ENST00000337404 991 ntTSL 2 BASIC16.44■□□□□ 0.22
RAE1P78406 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC16.44■□□□□ 0.22
RAE1P78406 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RAE1P78406 AL020989.1-201ENST00000422979 469 ntBASIC16.44■□□□□ 0.22
RAE1P78406 SRP19-202ENST00000445150 833 ntTSL 2 BASIC16.44■□□□□ 0.22
RAE1P78406 ABCD1P5-201ENST00000445663 754 ntBASIC16.44■□□□□ 0.22
RAE1P78406 NUS1P1-201ENST00000446295 882 ntBASIC16.44■□□□□ 0.22
RAE1P78406 RBSN-204ENST00000449050 903 ntTSL 2 BASIC16.44■□□□□ 0.22
RAE1P78406 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC16.44■□□□□ 0.22
RAE1P78406 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC16.44■□□□□ 0.22
RAE1P78406 COX5A-204ENST00000567270 579 ntTSL 3 BASIC16.44■□□□□ 0.22
RAE1P78406 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RAE1P78406 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
RAE1P78406 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC16.44■□□□□ 0.22
RAE1P78406 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RAE1P78406 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
RAE1P78406 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
RAE1P78406 FLJ38576-201ENST00000623820 2459 ntBASIC16.44■□□□□ 0.22
RAE1P78406 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
RAE1P78406 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RAE1P78406 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC16.44■□□□□ 0.22
RAE1P78406 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
RAE1P78406 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
RAE1P78406 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RAE1P78406 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC16.44■□□□□ 0.22
RAE1P78406 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
RAE1P78406 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
RAE1P78406 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC16.43■□□□□ 0.22
RAE1P78406 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC16.43■□□□□ 0.22
RAE1P78406 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC16.43■□□□□ 0.22
RAE1P78406 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RAE1P78406 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC16.43■□□□□ 0.22
RAE1P78406 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RAE1P78406 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RAE1P78406 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
RAE1P78406 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC16.43■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms