Protein–RNA interactions for Protein: P56645

PER3, Period circadian protein homolog 3, humanhuman

Predictions only

Length 1,201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PER3P56645 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
PER3P56645 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
PER3P56645 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
PER3P56645 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PER3P56645 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
PER3P56645 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
PER3P56645 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC16.11■□□□□ 0.17
PER3P56645 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PER3P56645 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
PER3P56645 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
PER3P56645 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PER3P56645 CSF3-203ENST00000394148 622 ntTSL 3 BASIC16.11■□□□□ 0.17
PER3P56645 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC16.11■□□□□ 0.17
PER3P56645 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PER3P56645 RAB17-203ENST00000409576 466 ntTSL 3 BASIC16.11■□□□□ 0.17
PER3P56645 RPS8P6-201ENST00000426177 609 ntBASIC16.11■□□□□ 0.17
PER3P56645 HNRNPDP1-201ENST00000439535 754 ntBASIC16.11■□□□□ 0.17
PER3P56645 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC16.11■□□□□ 0.17
PER3P56645 AC004967.1-201ENST00000453589 447 ntBASIC16.11■□□□□ 0.17
PER3P56645 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC16.11■□□□□ 0.17
PER3P56645 DHDH-204ENST00000523250 634 ntTSL 5 BASIC16.11■□□□□ 0.17
PER3P56645 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC16.11■□□□□ 0.17
PER3P56645 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC16.11■□□□□ 0.17
PER3P56645 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC16.11■□□□□ 0.17
PER3P56645 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PER3P56645 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
PER3P56645 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
PER3P56645 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PER3P56645 GNAS-203ENST00000306120 1878 ntBASIC16.11■□□□□ 0.17
PER3P56645 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC16.11■□□□□ 0.17
PER3P56645 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
PER3P56645 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
PER3P56645 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC16.11■□□□□ 0.17
PER3P56645 AL356309.3-201ENST00000624132 1934 ntBASIC16.11■□□□□ 0.17
PER3P56645 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PER3P56645 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
PER3P56645 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
PER3P56645 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
PER3P56645 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PER3P56645 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PER3P56645 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
PER3P56645 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
PER3P56645 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
PER3P56645 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PER3P56645 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PER3P56645 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
PER3P56645 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PER3P56645 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
PER3P56645 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PER3P56645 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC16.1■□□□□ 0.17
PER3P56645 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
PER3P56645 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
PER3P56645 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PER3P56645 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
PER3P56645 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC16.1■□□□□ 0.17
PER3P56645 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC16.1■□□□□ 0.17
PER3P56645 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PER3P56645 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
PER3P56645 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
PER3P56645 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
PER3P56645 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC16.1■□□□□ 0.17
PER3P56645 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC16.1■□□□□ 0.17
PER3P56645 RPSAP43-201ENST00000402237 625 ntBASIC16.1■□□□□ 0.17
PER3P56645 AC092910.1-201ENST00000482027 1129 ntBASIC16.1■□□□□ 0.17
PER3P56645 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC16.1■□□□□ 0.17
PER3P56645 AP001269.4-201ENST00000609611 512 ntBASIC16.1■□□□□ 0.17
PER3P56645 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC16.1■□□□□ 0.17
PER3P56645 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC16.1■□□□□ 0.17
PER3P56645 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PER3P56645 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
PER3P56645 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
PER3P56645 LINC00602-201ENST00000629776 2065 ntBASIC16.1■□□□□ 0.17
PER3P56645 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
PER3P56645 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PER3P56645 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
PER3P56645 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
PER3P56645 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PER3P56645 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC16.1■□□□□ 0.17
PER3P56645 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
PER3P56645 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PER3P56645 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
PER3P56645 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
PER3P56645 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
PER3P56645 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
PER3P56645 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PER3P56645 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PER3P56645 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
PER3P56645 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PER3P56645 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
PER3P56645 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
PER3P56645 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
PER3P56645 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
PER3P56645 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
PER3P56645 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
PER3P56645 AD000864.1-201ENST00000624076 2295 ntBASIC16.09■□□□□ 0.17
PER3P56645 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
PER3P56645 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC16.09■□□□□ 0.17
PER3P56645 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
PER3P56645 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
PER3P56645 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 41.6 ms