Protein–RNA interactions for Protein: P55283

CDH4, Cadherin-4, humanhuman

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4P55283 RPL13AP23-201ENST00000480739 586 ntBASIC17.71■□□□□ 0.43
CDH4P55283 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC17.71■□□□□ 0.43
CDH4P55283 RPS15P9-201ENST00000494093 319 ntBASIC17.71■□□□□ 0.43
CDH4P55283 RNA5SP415-201ENST00000517246 115 ntBASIC17.71■□□□□ 0.43
CDH4P55283 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CDH4P55283 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
CDH4P55283 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC17.71■□□□□ 0.43
CDH4P55283 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CDH4P55283 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CDH4P55283 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC17.71■□□□□ 0.43
CDH4P55283 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC17.71■□□□□ 0.43
CDH4P55283 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CDH4P55283 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.42
CDH4P55283 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.42
CDH4P55283 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CDH4P55283 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC17.7■□□□□ 0.42
CDH4P55283 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC17.7■□□□□ 0.42
CDH4P55283 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC17.7■□□□□ 0.42
CDH4P55283 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC17.7■□□□□ 0.42
CDH4P55283 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
CDH4P55283 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
CDH4P55283 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC17.7■□□□□ 0.42
CDH4P55283 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC17.7■□□□□ 0.42
CDH4P55283 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC17.7■□□□□ 0.42
CDH4P55283 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CDH4P55283 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CDH4P55283 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC17.7■□□□□ 0.42
CDH4P55283 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
CDH4P55283 AP002414.1-201ENST00000391405 1147 ntBASIC17.7■□□□□ 0.42
CDH4P55283 AL022342.1-201ENST00000400363 863 ntBASIC17.7■□□□□ 0.42
CDH4P55283 PTCHD3P3-201ENST00000403073 906 ntBASIC17.7■□□□□ 0.42
CDH4P55283 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
CDH4P55283 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
CDH4P55283 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CDH4P55283 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC17.7■□□□□ 0.42
CDH4P55283 UNC93B6-202ENST00000528242 690 ntBASIC17.7■□□□□ 0.42
CDH4P55283 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CDH4P55283 RPL18-209ENST00000550645 463 ntTSL 5 BASIC17.7■□□□□ 0.42
CDH4P55283 RPL18-214ENST00000552588 559 ntTSL 3 BASIC17.7■□□□□ 0.42
CDH4P55283 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC17.7■□□□□ 0.42
CDH4P55283 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC17.7■□□□□ 0.42
CDH4P55283 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC17.7■□□□□ 0.42
CDH4P55283 AC145285.3-201ENST00000564603 959 ntBASIC17.7■□□□□ 0.42
CDH4P55283 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC17.7■□□□□ 0.42
CDH4P55283 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CDH4P55283 NME4-212ENST00000621774 904 ntTSL 3 BASIC17.7■□□□□ 0.42
CDH4P55283 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CDH4P55283 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC17.7■□□□□ 0.42
CDH4P55283 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC17.7■□□□□ 0.42
CDH4P55283 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC17.7■□□□□ 0.42
CDH4P55283 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CDH4P55283 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
CDH4P55283 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC17.7■□□□□ 0.42
CDH4P55283 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
CDH4P55283 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC17.7■□□□□ 0.42
CDH4P55283 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC17.7■□□□□ 0.42
CDH4P55283 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CDH4P55283 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC17.69■□□□□ 0.42
CDH4P55283 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CDH4P55283 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
CDH4P55283 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
CDH4P55283 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CDH4P55283 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CDH4P55283 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
CDH4P55283 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CDH4P55283 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CDH4P55283 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
CDH4P55283 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
CDH4P55283 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CDH4P55283 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC17.69■□□□□ 0.42
CDH4P55283 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CDH4P55283 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC17.69■□□□□ 0.42
CDH4P55283 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC17.69■□□□□ 0.42
CDH4P55283 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC17.69■□□□□ 0.42
CDH4P55283 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CDH4P55283 WDR88-203ENST00000592765 651 ntTSL 5 BASIC17.69■□□□□ 0.42
CDH4P55283 AC008667.4-201ENST00000607370 168 ntBASIC17.69■□□□□ 0.42
CDH4P55283 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
CDH4P55283 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CDH4P55283 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CDH4P55283 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
CDH4P55283 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
CDH4P55283 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC17.69■□□□□ 0.42
CDH4P55283 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CDH4P55283 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC17.69■□□□□ 0.42
CDH4P55283 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
CDH4P55283 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
CDH4P55283 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CDH4P55283 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC17.69■□□□□ 0.42
CDH4P55283 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
CDH4P55283 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CDH4P55283 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC17.68■□□□□ 0.42
CDH4P55283 AC116353.5-201ENST00000638148 1699 ntBASIC17.68■□□□□ 0.42
CDH4P55283 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
CDH4P55283 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
CDH4P55283 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
CDH4P55283 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CDH4P55283 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CDH4P55283 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC17.68■□□□□ 0.42
CDH4P55283 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms