Protein–RNA interactions for Protein: P52926

HMGA2, High mobility group protein HMGI-C, humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2P52926 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC15.84■□□□□ 0.13
HMGA2P52926 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC15.84■□□□□ 0.13
HMGA2P52926 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
HMGA2P52926 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC15.84■□□□□ 0.13
HMGA2P52926 AL353593.2-201ENST00000602529 1483 ntBASIC15.84■□□□□ 0.13
HMGA2P52926 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC15.84■□□□□ 0.13
HMGA2P52926 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC15.83■□□□□ 0.13
HMGA2P52926 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC15.83■□□□□ 0.13
HMGA2P52926 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.13
HMGA2P52926 Z83836.1-201ENST00000624605 1642 ntBASIC15.83■□□□□ 0.13
HMGA2P52926 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
HMGA2P52926 AL135999.2-201ENST00000622438 1686 ntBASIC15.83■□□□□ 0.13
HMGA2P52926 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC15.83■□□□□ 0.12
HMGA2P52926 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC15.83■□□□□ 0.12
HMGA2P52926 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
HMGA2P52926 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
HMGA2P52926 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
HMGA2P52926 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
HMGA2P52926 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
HMGA2P52926 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC15.83■□□□□ 0.12
HMGA2P52926 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
HMGA2P52926 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
HMGA2P52926 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC15.83■□□□□ 0.12
HMGA2P52926 ATP5G1P1-201ENST00000448724 379 ntBASIC15.83■□□□□ 0.12
HMGA2P52926 AL359075.1-203ENST00000462729 1002 ntBASIC15.83■□□□□ 0.12
HMGA2P52926 RN7SL606P-201ENST00000472779 293 ntBASIC15.83■□□□□ 0.12
HMGA2P52926 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
HMGA2P52926 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC15.83■□□□□ 0.12
HMGA2P52926 AL138831.2-201ENST00000606564 490 ntBASIC15.83■□□□□ 0.12
HMGA2P52926 AC139887.4-201ENST00000607877 719 ntBASIC15.83■□□□□ 0.12
HMGA2P52926 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC15.83■□□□□ 0.12
HMGA2P52926 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
HMGA2P52926 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC15.83■□□□□ 0.12
HMGA2P52926 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
HMGA2P52926 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
HMGA2P52926 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC15.83■□□□□ 0.12
HMGA2P52926 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
HMGA2P52926 GPR89P-201ENST00000407924 1495 ntBASIC15.83■□□□□ 0.12
HMGA2P52926 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC15.83■□□□□ 0.12
HMGA2P52926 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
HMGA2P52926 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC15.83■□□□□ 0.12
HMGA2P52926 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
HMGA2P52926 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
HMGA2P52926 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC15.83■□□□□ 0.12
HMGA2P52926 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
HMGA2P52926 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC15.82■□□□□ 0.12
HMGA2P52926 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
HMGA2P52926 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC15.82■□□□□ 0.12
HMGA2P52926 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
HMGA2P52926 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
HMGA2P52926 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
HMGA2P52926 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
HMGA2P52926 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
HMGA2P52926 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
HMGA2P52926 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC15.82■□□□□ 0.12
HMGA2P52926 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
HMGA2P52926 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
HMGA2P52926 HOMER2P1-201ENST00000455653 964 ntBASIC15.82■□□□□ 0.12
HMGA2P52926 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
HMGA2P52926 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC15.82■□□□□ 0.12
HMGA2P52926 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
HMGA2P52926 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC15.82■□□□□ 0.12
HMGA2P52926 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC15.82■□□□□ 0.12
HMGA2P52926 WDR6-223ENST00000627177 207 ntTSL 2 BASIC15.82■□□□□ 0.12
HMGA2P52926 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC15.82■□□□□ 0.12
HMGA2P52926 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC15.82■□□□□ 0.12
HMGA2P52926 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
HMGA2P52926 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
HMGA2P52926 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
HMGA2P52926 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC15.82■□□□□ 0.12
HMGA2P52926 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
HMGA2P52926 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
HMGA2P52926 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC15.82■□□□□ 0.12
HMGA2P52926 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC15.82■□□□□ 0.12
HMGA2P52926 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
HMGA2P52926 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
HMGA2P52926 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
HMGA2P52926 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
HMGA2P52926 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
HMGA2P52926 AL513523.2-202ENST00000427283 2040 ntBASIC15.82■□□□□ 0.12
HMGA2P52926 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
HMGA2P52926 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
HMGA2P52926 FRMD6-AS1-201ENST00000617151 2229 ntBASIC15.82■□□□□ 0.12
HMGA2P52926 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
HMGA2P52926 AL162727.3-201ENST00000635661 2787 ntBASIC15.81■□□□□ 0.12
HMGA2P52926 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
HMGA2P52926 AL139384.1-201ENST00000612143 3047 ntBASIC15.81■□□□□ 0.12
HMGA2P52926 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
HMGA2P52926 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
HMGA2P52926 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
HMGA2P52926 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC15.81■□□□□ 0.12
HMGA2P52926 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
HMGA2P52926 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
HMGA2P52926 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
HMGA2P52926 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
HMGA2P52926 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC15.81■□□□□ 0.12
HMGA2P52926 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC15.81■□□□□ 0.12
HMGA2P52926 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
HMGA2P52926 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
HMGA2P52926 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms