Protein–RNA interactions for Protein: P52657

GTF2A2, Transcription initiation factor IIA subunit 2, humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A2P52657 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
GTF2A2P52657 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
GTF2A2P52657 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC19.84■□□□□ 0.77
GTF2A2P52657 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
GTF2A2P52657 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.77
GTF2A2P52657 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
GTF2A2P52657 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
GTF2A2P52657 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
GTF2A2P52657 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.77
GTF2A2P52657 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC19.83■□□□□ 0.77
GTF2A2P52657 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
GTF2A2P52657 GOLGA6L11P-201ENST00000417252 1298 ntBASIC19.83■□□□□ 0.77
GTF2A2P52657 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC19.83■□□□□ 0.77
GTF2A2P52657 CRB3P1-201ENST00000449338 276 ntBASIC19.83■□□□□ 0.77
GTF2A2P52657 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC19.83■□□□□ 0.77
GTF2A2P52657 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC19.83■□□□□ 0.77
GTF2A2P52657 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC19.83■□□□□ 0.77
GTF2A2P52657 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC19.83■□□□□ 0.76
GTF2A2P52657 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
GTF2A2P52657 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC19.83■□□□□ 0.76
GTF2A2P52657 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC19.83■□□□□ 0.76
GTF2A2P52657 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
GTF2A2P52657 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
GTF2A2P52657 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
GTF2A2P52657 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC19.83■□□□□ 0.76
GTF2A2P52657 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC19.83■□□□□ 0.76
GTF2A2P52657 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
GTF2A2P52657 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
GTF2A2P52657 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
GTF2A2P52657 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
GTF2A2P52657 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC19.82■□□□□ 0.76
GTF2A2P52657 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
GTF2A2P52657 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
GTF2A2P52657 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC19.82■□□□□ 0.76
GTF2A2P52657 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC19.82■□□□□ 0.76
GTF2A2P52657 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
GTF2A2P52657 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
GTF2A2P52657 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
GTF2A2P52657 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC19.82■□□□□ 0.76
GTF2A2P52657 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
GTF2A2P52657 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
GTF2A2P52657 GRAP-202ENST00000395635 834 ntTSL 2 BASIC19.82■□□□□ 0.76
GTF2A2P52657 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC19.82■□□□□ 0.76
GTF2A2P52657 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC19.82■□□□□ 0.76
GTF2A2P52657 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
GTF2A2P52657 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC19.82■□□□□ 0.76
GTF2A2P52657 GATD1-206ENST00000526325 756 ntTSL 5 BASIC19.82■□□□□ 0.76
GTF2A2P52657 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC19.82■□□□□ 0.76
GTF2A2P52657 AL139327.4-201ENST00000612362 153 ntBASIC19.82■□□□□ 0.76
GTF2A2P52657 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
GTF2A2P52657 MIR6080-201ENST00000617359 66 ntBASIC19.82■□□□□ 0.76
GTF2A2P52657 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC19.82■□□□□ 0.76
GTF2A2P52657 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
GTF2A2P52657 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
GTF2A2P52657 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
GTF2A2P52657 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
GTF2A2P52657 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
GTF2A2P52657 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
GTF2A2P52657 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC19.81■□□□□ 0.76
GTF2A2P52657 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
GTF2A2P52657 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC19.81■□□□□ 0.76
GTF2A2P52657 STK4-201ENST00000372801 2038 ntTSL 2 BASIC19.81■□□□□ 0.76
GTF2A2P52657 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
GTF2A2P52657 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
GTF2A2P52657 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
GTF2A2P52657 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC19.81■□□□□ 0.76
GTF2A2P52657 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
GTF2A2P52657 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC19.81■□□□□ 0.76
GTF2A2P52657 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
GTF2A2P52657 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
GTF2A2P52657 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
GTF2A2P52657 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
GTF2A2P52657 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC19.81■□□□□ 0.76
GTF2A2P52657 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC19.81■□□□□ 0.76
GTF2A2P52657 AC109635.5-201ENST00000533593 962 ntBASIC19.81■□□□□ 0.76
GTF2A2P52657 CR383656.12-201ENST00000549567 513 ntBASIC19.81■□□□□ 0.76
GTF2A2P52657 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC19.81■□□□□ 0.76
GTF2A2P52657 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC19.81■□□□□ 0.76
GTF2A2P52657 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC19.81■□□□□ 0.76
GTF2A2P52657 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC19.81■□□□□ 0.76
GTF2A2P52657 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC19.81■□□□□ 0.76
GTF2A2P52657 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
GTF2A2P52657 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
GTF2A2P52657 AC012569.1-201ENST00000591191 1524 ntBASIC19.81■□□□□ 0.76
GTF2A2P52657 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
GTF2A2P52657 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
GTF2A2P52657 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC19.81■□□□□ 0.76
GTF2A2P52657 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
GTF2A2P52657 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC19.81■□□□□ 0.76
GTF2A2P52657 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
GTF2A2P52657 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC19.8■□□□□ 0.76
GTF2A2P52657 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC19.8■□□□□ 0.76
GTF2A2P52657 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
GTF2A2P52657 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
GTF2A2P52657 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
GTF2A2P52657 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
GTF2A2P52657 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
GTF2A2P52657 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC19.8■□□□□ 0.76
GTF2A2P52657 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
GTF2A2P52657 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 45.4 ms