Protein–RNA interactions for Protein: P50213

IDH3A, Isocitrate dehydrogenase [NAD] subunit alpha, mitochondrial, humanhuman

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IDH3AP50213 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
IDH3AP50213 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.3
IDH3AP50213 AC011270.2-201ENST00000624293 2550 ntBASIC16.89■□□□□ 0.3
IDH3AP50213 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC16.89■□□□□ 0.29
IDH3AP50213 PGR-209ENST00000617858 2816 ntTSL 5 BASIC16.89■□□□□ 0.29
IDH3AP50213 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
IDH3AP50213 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
IDH3AP50213 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
IDH3AP50213 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC16.89■□□□□ 0.29
IDH3AP50213 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC16.89■□□□□ 0.29
IDH3AP50213 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
IDH3AP50213 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
IDH3AP50213 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.29
IDH3AP50213 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
IDH3AP50213 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
IDH3AP50213 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC16.89■□□□□ 0.29
IDH3AP50213 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
IDH3AP50213 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC16.89■□□□□ 0.29
IDH3AP50213 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
IDH3AP50213 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
IDH3AP50213 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
IDH3AP50213 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
IDH3AP50213 KRT18P48-201ENST00000434763 852 ntBASIC16.89■□□□□ 0.29
IDH3AP50213 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC16.89■□□□□ 0.29
IDH3AP50213 CNP-204ENST00000472031 1019 ntTSL 2 BASIC16.89■□□□□ 0.29
IDH3AP50213 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC16.89■□□□□ 0.29
IDH3AP50213 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC16.89■□□□□ 0.29
IDH3AP50213 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
IDH3AP50213 SNX21-213ENST00000614929 587 ntTSL 5 BASIC16.89■□□□□ 0.29
IDH3AP50213 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
IDH3AP50213 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC16.89■□□□□ 0.29
IDH3AP50213 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC16.89■□□□□ 0.29
IDH3AP50213 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC16.89■□□□□ 0.29
IDH3AP50213 AL513523.2-202ENST00000427283 2040 ntBASIC16.89■□□□□ 0.29
IDH3AP50213 AC010460.3-201ENST00000511359 1579 ntBASIC16.89■□□□□ 0.29
IDH3AP50213 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC16.89■□□□□ 0.29
IDH3AP50213 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
IDH3AP50213 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC16.89■□□□□ 0.29
IDH3AP50213 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC16.89■□□□□ 0.29
IDH3AP50213 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
IDH3AP50213 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
IDH3AP50213 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
IDH3AP50213 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.29
IDH3AP50213 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
IDH3AP50213 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
IDH3AP50213 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC16.88■□□□□ 0.29
IDH3AP50213 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
IDH3AP50213 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
IDH3AP50213 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
IDH3AP50213 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
IDH3AP50213 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC16.88■□□□□ 0.29
IDH3AP50213 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC16.88■□□□□ 0.29
IDH3AP50213 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC16.88■□□□□ 0.29
IDH3AP50213 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
IDH3AP50213 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
IDH3AP50213 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
IDH3AP50213 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC16.88■□□□□ 0.29
IDH3AP50213 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC16.88■□□□□ 0.29
IDH3AP50213 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
IDH3AP50213 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
IDH3AP50213 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
IDH3AP50213 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
IDH3AP50213 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC16.88■□□□□ 0.29
IDH3AP50213 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC16.88■□□□□ 0.29
IDH3AP50213 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC16.88■□□□□ 0.29
IDH3AP50213 AC068472.1-201ENST00000474589 881 ntBASIC16.88■□□□□ 0.29
IDH3AP50213 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC16.88■□□□□ 0.29
IDH3AP50213 GPX4-207ENST00000589115 812 ntTSL 2 BASIC16.88■□□□□ 0.29
IDH3AP50213 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
IDH3AP50213 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
IDH3AP50213 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
IDH3AP50213 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC16.88■□□□□ 0.29
IDH3AP50213 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
IDH3AP50213 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC16.88■□□□□ 0.29
IDH3AP50213 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
IDH3AP50213 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC16.88■□□□□ 0.29
IDH3AP50213 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC16.88■□□□□ 0.29
IDH3AP50213 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
IDH3AP50213 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC16.88■□□□□ 0.29
IDH3AP50213 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC16.88■□□□□ 0.29
IDH3AP50213 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
IDH3AP50213 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC16.87■□□□□ 0.29
IDH3AP50213 AC007950.2-201ENST00000615045 2347 ntBASIC16.87■□□□□ 0.29
IDH3AP50213 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
IDH3AP50213 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
IDH3AP50213 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
IDH3AP50213 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
IDH3AP50213 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
IDH3AP50213 STX3-203ENST00000529177 1571 ntTSL 2 BASIC16.87■□□□□ 0.29
IDH3AP50213 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
IDH3AP50213 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
IDH3AP50213 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
IDH3AP50213 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
IDH3AP50213 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
IDH3AP50213 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
IDH3AP50213 DDT-203ENST00000403754 569 ntTSL 3 BASIC16.87■□□□□ 0.29
IDH3AP50213 DDT-206ENST00000430101 573 ntTSL 2 BASIC16.87■□□□□ 0.29
IDH3AP50213 RASA4DP-201ENST00000460726 1199 ntBASIC16.87■□□□□ 0.29
IDH3AP50213 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
IDH3AP50213 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 42 ms