Protein–RNA interactions for Protein: P48764

SLC9A3, Sodium/hydrogen exchanger 3, humanhuman

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC9A3P48764 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
SLC9A3P48764 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
SLC9A3P48764 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
SLC9A3P48764 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC15.96■□□□□ 0.15
SLC9A3P48764 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC15.96■□□□□ 0.15
SLC9A3P48764 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
SLC9A3P48764 AC005521.1-201ENST00000393351 872 ntBASIC15.96■□□□□ 0.15
SLC9A3P48764 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
SLC9A3P48764 KRT18P57-201ENST00000443599 1254 ntBASIC15.96■□□□□ 0.15
SLC9A3P48764 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
SLC9A3P48764 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
SLC9A3P48764 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC15.96■□□□□ 0.15
SLC9A3P48764 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC15.96■□□□□ 0.15
SLC9A3P48764 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
SLC9A3P48764 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
SLC9A3P48764 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC15.96■□□□□ 0.15
SLC9A3P48764 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC15.96■□□□□ 0.15
SLC9A3P48764 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
SLC9A3P48764 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC15.96■□□□□ 0.14
SLC9A3P48764 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
SLC9A3P48764 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
SLC9A3P48764 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC15.96■□□□□ 0.14
SLC9A3P48764 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
SLC9A3P48764 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC15.96■□□□□ 0.14
SLC9A3P48764 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.14
SLC9A3P48764 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC15.96■□□□□ 0.14
SLC9A3P48764 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC15.96■□□□□ 0.14
SLC9A3P48764 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
SLC9A3P48764 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
SLC9A3P48764 AC097374.2-201ENST00000618617 1306 ntBASIC15.95■□□□□ 0.14
SLC9A3P48764 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
SLC9A3P48764 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
SLC9A3P48764 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC15.95■□□□□ 0.14
SLC9A3P48764 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
SLC9A3P48764 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
SLC9A3P48764 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC15.95■□□□□ 0.14
SLC9A3P48764 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
SLC9A3P48764 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
SLC9A3P48764 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
SLC9A3P48764 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
SLC9A3P48764 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
SLC9A3P48764 BAALC-202ENST00000306391 243 ntTSL 5 BASIC15.95■□□□□ 0.14
SLC9A3P48764 BAALC-204ENST00000330955 222 ntTSL 5 BASIC15.95■□□□□ 0.14
SLC9A3P48764 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
SLC9A3P48764 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
SLC9A3P48764 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
SLC9A3P48764 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC15.95■□□□□ 0.14
SLC9A3P48764 AC112907.2-201ENST00000448639 330 ntBASIC15.95■□□□□ 0.14
SLC9A3P48764 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC15.95■□□□□ 0.14
SLC9A3P48764 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC15.95■□□□□ 0.14
SLC9A3P48764 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC15.95■□□□□ 0.14
SLC9A3P48764 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC15.95■□□□□ 0.14
SLC9A3P48764 AC005332.3-201ENST00000589904 676 ntBASIC15.95■□□□□ 0.14
SLC9A3P48764 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC15.95■□□□□ 0.14
SLC9A3P48764 AL390719.2-201ENST00000606993 987 ntBASIC15.95■□□□□ 0.14
SLC9A3P48764 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
SLC9A3P48764 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
SLC9A3P48764 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC15.95■□□□□ 0.14
SLC9A3P48764 AC105020.1-201ENST00000435356 2205 ntBASIC15.95■□□□□ 0.14
SLC9A3P48764 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC15.95■□□□□ 0.14
SLC9A3P48764 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
SLC9A3P48764 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC15.95■□□□□ 0.14
SLC9A3P48764 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC15.95■□□□□ 0.14
SLC9A3P48764 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
SLC9A3P48764 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC15.95■□□□□ 0.14
SLC9A3P48764 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
SLC9A3P48764 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
SLC9A3P48764 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
SLC9A3P48764 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
SLC9A3P48764 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC15.95■□□□□ 0.14
SLC9A3P48764 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC15.94■□□□□ 0.14
SLC9A3P48764 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC15.94■□□□□ 0.14
SLC9A3P48764 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
SLC9A3P48764 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
SLC9A3P48764 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
SLC9A3P48764 LINC01311-201ENST00000565162 1445 ntBASIC15.94■□□□□ 0.14
SLC9A3P48764 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
SLC9A3P48764 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
SLC9A3P48764 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
SLC9A3P48764 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
SLC9A3P48764 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
SLC9A3P48764 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC15.94■□□□□ 0.14
SLC9A3P48764 LYSMD4-203ENST00000378904 2122 ntBASIC15.94■□□□□ 0.14
SLC9A3P48764 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
SLC9A3P48764 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
SLC9A3P48764 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
SLC9A3P48764 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
SLC9A3P48764 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
SLC9A3P48764 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
SLC9A3P48764 AK4P3-201ENST00000418260 669 ntBASIC15.94■□□□□ 0.14
SLC9A3P48764 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC15.94■□□□□ 0.14
SLC9A3P48764 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC15.94■□□□□ 0.14
SLC9A3P48764 KRT18P38-201ENST00000449496 1282 ntBASIC15.94■□□□□ 0.14
SLC9A3P48764 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC15.94■□□□□ 0.14
SLC9A3P48764 CNP-204ENST00000472031 1019 ntTSL 2 BASIC15.94■□□□□ 0.14
SLC9A3P48764 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
SLC9A3P48764 AC002558.1-201ENST00000488906 803 ntBASIC15.94■□□□□ 0.14
SLC9A3P48764 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
SLC9A3P48764 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC15.94■□□□□ 0.14
SLC9A3P48764 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms