Protein–RNA interactions for Protein: P48664

SLC1A6, Excitatory amino acid transporter 4, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A6P48664 TSPY15P-201ENST00000457163 923 ntBASIC17.1■□□□□ 0.33
SLC1A6P48664 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC17.1■□□□□ 0.33
SLC1A6P48664 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC17.1■□□□□ 0.33
SLC1A6P48664 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SLC1A6P48664 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC17.1■□□□□ 0.33
SLC1A6P48664 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC17.1■□□□□ 0.33
SLC1A6P48664 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
SLC1A6P48664 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SLC1A6P48664 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC17.1■□□□□ 0.33
SLC1A6P48664 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SLC1A6P48664 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SLC1A6P48664 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
SLC1A6P48664 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SLC1A6P48664 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
SLC1A6P48664 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SLC1A6P48664 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SLC1A6P48664 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SLC1A6P48664 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SLC1A6P48664 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
SLC1A6P48664 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SLC1A6P48664 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SLC1A6P48664 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SLC1A6P48664 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SLC1A6P48664 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC17.09■□□□□ 0.33
SLC1A6P48664 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC17.09■□□□□ 0.33
SLC1A6P48664 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC17.09■□□□□ 0.33
SLC1A6P48664 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
SLC1A6P48664 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC17.09■□□□□ 0.33
SLC1A6P48664 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
SLC1A6P48664 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SLC1A6P48664 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC17.09■□□□□ 0.33
SLC1A6P48664 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
SLC1A6P48664 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SLC1A6P48664 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SLC1A6P48664 MMP23A-201ENST00000234610 1017 ntBASIC17.09■□□□□ 0.33
SLC1A6P48664 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC17.09■□□□□ 0.33
SLC1A6P48664 AC068472.1-201ENST00000474589 881 ntBASIC17.09■□□□□ 0.33
SLC1A6P48664 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC17.09■□□□□ 0.33
SLC1A6P48664 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
SLC1A6P48664 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SLC1A6P48664 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
SLC1A6P48664 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC17.09■□□□□ 0.33
SLC1A6P48664 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SLC1A6P48664 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
SLC1A6P48664 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SLC1A6P48664 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC17.09■□□□□ 0.33
SLC1A6P48664 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
SLC1A6P48664 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SLC1A6P48664 CHRM2-201ENST00000320658 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SLC1A6P48664 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
SLC1A6P48664 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SLC1A6P48664 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC17.09■□□□□ 0.33
SLC1A6P48664 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
SLC1A6P48664 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC17.09■□□□□ 0.33
SLC1A6P48664 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC17.09■□□□□ 0.33
SLC1A6P48664 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
SLC1A6P48664 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SLC1A6P48664 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SLC1A6P48664 AL162727.3-201ENST00000635661 2787 ntBASIC17.08■□□□□ 0.33
SLC1A6P48664 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC17.08■□□□□ 0.33
SLC1A6P48664 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC17.08■□□□□ 0.33
SLC1A6P48664 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
SLC1A6P48664 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
SLC1A6P48664 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.33
SLC1A6P48664 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
SLC1A6P48664 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
SLC1A6P48664 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC17.08■□□□□ 0.32
SLC1A6P48664 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SLC1A6P48664 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
SLC1A6P48664 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC17.08■□□□□ 0.32
SLC1A6P48664 TBC1D3P5-201ENST00000579401 1545 ntBASIC17.08■□□□□ 0.32
SLC1A6P48664 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SLC1A6P48664 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SLC1A6P48664 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC17.08■□□□□ 0.32
SLC1A6P48664 COX5BP2-201ENST00000392354 334 ntBASIC17.08■□□□□ 0.32
SLC1A6P48664 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC17.08■□□□□ 0.32
SLC1A6P48664 CNP-204ENST00000472031 1019 ntTSL 2 BASIC17.08■□□□□ 0.32
SLC1A6P48664 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
SLC1A6P48664 AC124947.2-201ENST00000547118 1133 ntBASIC17.08■□□□□ 0.32
SLC1A6P48664 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC17.08■□□□□ 0.32
SLC1A6P48664 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC17.08■□□□□ 0.32
SLC1A6P48664 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC17.08■□□□□ 0.32
SLC1A6P48664 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC17.08■□□□□ 0.32
SLC1A6P48664 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
SLC1A6P48664 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SLC1A6P48664 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
SLC1A6P48664 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC17.08■□□□□ 0.32
SLC1A6P48664 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SLC1A6P48664 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC17.08■□□□□ 0.32
SLC1A6P48664 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SLC1A6P48664 AC026691.1-201ENST00000602502 2017 ntBASIC17.08■□□□□ 0.32
SLC1A6P48664 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC17.08■□□□□ 0.32
SLC1A6P48664 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC17.08■□□□□ 0.32
SLC1A6P48664 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SLC1A6P48664 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
SLC1A6P48664 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SLC1A6P48664 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC17.07■□□□□ 0.32
SLC1A6P48664 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
SLC1A6P48664 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
SLC1A6P48664 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC17.07■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms