Protein–RNA interactions for Protein: P42695

NCAPD3, Condensin-2 complex subunit D3, humanhuman

Predictions only

Length 1,498 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCAPD3P42695 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC30.19■■■□□ 2.42
NCAPD3P42695 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC30.19■■■□□ 2.42
NCAPD3P42695 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC30.19■■■□□ 2.42
NCAPD3P42695 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC30.19■■■□□ 2.42
NCAPD3P42695 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC30.19■■■□□ 2.42
NCAPD3P42695 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC30.19■■■□□ 2.42
NCAPD3P42695 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC30.19■■■□□ 2.42
NCAPD3P42695 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC30.19■■■□□ 2.42
NCAPD3P42695 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC30.19■■■□□ 2.42
NCAPD3P42695 RPL37AP1-201ENST00000412502 279 ntBASIC30.19■■■□□ 2.42
NCAPD3P42695 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC30.19■■■□□ 2.42
NCAPD3P42695 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC30.19■■■□□ 2.42
NCAPD3P42695 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC30.19■■■□□ 2.42
NCAPD3P42695 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC30.19■■■□□ 2.42
NCAPD3P42695 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC30.19■■■□□ 2.42
NCAPD3P42695 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC30.19■■■□□ 2.42
NCAPD3P42695 MIR4525-201ENST00000580000 75 ntBASIC30.19■■■□□ 2.42
NCAPD3P42695 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC30.18■■■□□ 2.42
NCAPD3P42695 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC30.18■■■□□ 2.42
NCAPD3P42695 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC30.18■■■□□ 2.42
NCAPD3P42695 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC30.18■■■□□ 2.42
NCAPD3P42695 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC30.18■■■□□ 2.42
NCAPD3P42695 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC30.18■■■□□ 2.42
NCAPD3P42695 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC30.18■■■□□ 2.42
NCAPD3P42695 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC30.18■■■□□ 2.42
NCAPD3P42695 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC30.18■■■□□ 2.42
NCAPD3P42695 BTBD7P1-201ENST00000447253 1453 ntBASIC30.18■■■□□ 2.42
NCAPD3P42695 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC30.18■■■□□ 2.42
NCAPD3P42695 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC30.18■■■□□ 2.42
NCAPD3P42695 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC30.18■■■□□ 2.42
NCAPD3P42695 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC30.18■■■□□ 2.42
NCAPD3P42695 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC30.18■■■□□ 2.42
NCAPD3P42695 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC30.18■■■□□ 2.42
NCAPD3P42695 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC30.18■■■□□ 2.42
NCAPD3P42695 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC30.18■■■□□ 2.42
NCAPD3P42695 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC30.18■■■□□ 2.42
NCAPD3P42695 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC30.18■■■□□ 2.42
NCAPD3P42695 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC30.18■■■□□ 2.42
NCAPD3P42695 AC003101.2-201ENST00000612557 442 ntBASIC30.18■■■□□ 2.42
NCAPD3P42695 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC30.18■■■□□ 2.42
NCAPD3P42695 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC30.18■■■□□ 2.42
NCAPD3P42695 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC30.18■■■□□ 2.42
NCAPD3P42695 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC30.18■■■□□ 2.42
NCAPD3P42695 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC30.17■■■□□ 2.42
NCAPD3P42695 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC30.17■■■□□ 2.42
NCAPD3P42695 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC30.17■■■□□ 2.42
NCAPD3P42695 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC30.17■■■□□ 2.42
NCAPD3P42695 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC30.17■■■□□ 2.42
NCAPD3P42695 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC30.17■■■□□ 2.42
NCAPD3P42695 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC30.17■■■□□ 2.42
NCAPD3P42695 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC30.17■■■□□ 2.42
NCAPD3P42695 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC30.17■■■□□ 2.42
NCAPD3P42695 SLC25A6P5-201ENST00000435663 894 ntBASIC30.17■■■□□ 2.42
NCAPD3P42695 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC30.17■■■□□ 2.42
NCAPD3P42695 GLI4-203ENST00000517468 963 ntTSL 5 BASIC30.17■■■□□ 2.42
NCAPD3P42695 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC30.17■■■□□ 2.42
NCAPD3P42695 MIR4259-201ENST00000584466 101 ntBASIC30.17■■■□□ 2.42
NCAPD3P42695 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC30.17■■■□□ 2.42
NCAPD3P42695 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC30.17■■■□□ 2.42
NCAPD3P42695 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC30.17■■■□□ 2.42
NCAPD3P42695 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC30.17■■■□□ 2.42
NCAPD3P42695 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC30.17■■■□□ 2.42
NCAPD3P42695 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC30.17■■■□□ 2.42
NCAPD3P42695 CROCCP3-202ENST00000420820 1947 ntBASIC30.17■■■□□ 2.42
NCAPD3P42695 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC30.17■■■□□ 2.42
NCAPD3P42695 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC30.16■■■□□ 2.42
NCAPD3P42695 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC30.16■■■□□ 2.42
NCAPD3P42695 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC30.16■■■□□ 2.42
NCAPD3P42695 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC30.16■■■□□ 2.42
NCAPD3P42695 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC30.16■■■□□ 2.42
NCAPD3P42695 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC30.16■■■□□ 2.42
NCAPD3P42695 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC30.15■■■□□ 2.42
NCAPD3P42695 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC30.15■■■□□ 2.42
NCAPD3P42695 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC30.15■■■□□ 2.42
NCAPD3P42695 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC30.15■■■□□ 2.42
NCAPD3P42695 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC30.15■■■□□ 2.42
NCAPD3P42695 LINC00895-201ENST00000629028 1637 ntBASIC30.15■■■□□ 2.42
NCAPD3P42695 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC30.15■■■□□ 2.42
NCAPD3P42695 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC30.15■■■□□ 2.42
NCAPD3P42695 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC30.15■■■□□ 2.42
NCAPD3P42695 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC30.15■■■□□ 2.42
NCAPD3P42695 RAB43P1-201ENST00000561790 589 ntBASIC30.15■■■□□ 2.42
NCAPD3P42695 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC30.15■■■□□ 2.42
NCAPD3P42695 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC30.15■■■□□ 2.42
NCAPD3P42695 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC30.15■■■□□ 2.42
NCAPD3P42695 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC30.15■■■□□ 2.42
NCAPD3P42695 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC30.15■■■□□ 2.42
NCAPD3P42695 AC116562.4-201ENST00000641316 2276 ntBASIC30.15■■■□□ 2.42
NCAPD3P42695 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC30.15■■■□□ 2.42
NCAPD3P42695 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC30.15■■■□□ 2.42
NCAPD3P42695 STX3-203ENST00000529177 1571 ntTSL 2 BASIC30.15■■■□□ 2.42
NCAPD3P42695 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC30.15■■■□□ 2.42
NCAPD3P42695 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC30.14■■■□□ 2.42
NCAPD3P42695 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC30.14■■■□□ 2.42
NCAPD3P42695 LINC01205-202ENST00000497996 1493 ntTSL 2 BASIC30.14■■■□□ 2.42
NCAPD3P42695 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC30.14■■■□□ 2.42
NCAPD3P42695 FAM25G-201ENST00000452267 345 ntAPPRIS P1 TSL 1 (best) BASIC30.14■■■□□ 2.42
NCAPD3P42695 RN7SL752P-201ENST00000463779 287 ntBASIC30.14■■■□□ 2.42
NCAPD3P42695 SPTSSB-204ENST00000617024 1292 ntBASIC30.14■■■□□ 2.42
NCAPD3P42695 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC30.14■■■□□ 2.42
Retrieved 100 of 98,524 protein–RNA pairs in 44.9 ms