Protein–RNA interactions for Protein: P41229

KDM5C, Lysine-specific demethylase 5C, humanhuman

Predictions only

Length 1,560 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDM5CP41229 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC25.69■■□□□ 1.7
KDM5CP41229 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC25.69■■□□□ 1.7
KDM5CP41229 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
KDM5CP41229 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC25.69■■□□□ 1.7
KDM5CP41229 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
KDM5CP41229 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
KDM5CP41229 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
KDM5CP41229 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC25.69■■□□□ 1.7
KDM5CP41229 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
KDM5CP41229 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC25.69■■□□□ 1.7
KDM5CP41229 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC25.69■■□□□ 1.7
KDM5CP41229 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC25.69■■□□□ 1.7
KDM5CP41229 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC25.69■■□□□ 1.7
KDM5CP41229 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC25.69■■□□□ 1.7
KDM5CP41229 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
KDM5CP41229 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
KDM5CP41229 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC25.68■■□□□ 1.7
KDM5CP41229 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC25.68■■□□□ 1.7
KDM5CP41229 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC25.68■■□□□ 1.7
KDM5CP41229 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
KDM5CP41229 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC25.68■■□□□ 1.7
KDM5CP41229 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC25.68■■□□□ 1.7
KDM5CP41229 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC25.68■■□□□ 1.7
KDM5CP41229 KRT18P55-202ENST00000578578 1546 ntBASIC25.68■■□□□ 1.7
KDM5CP41229 RNU1-129P-201ENST00000384064 167 ntBASIC25.68■■□□□ 1.7
KDM5CP41229 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC25.68■■□□□ 1.7
KDM5CP41229 U91328.1-201ENST00000437528 223 ntBASIC25.68■■□□□ 1.7
KDM5CP41229 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC25.68■■□□□ 1.7
KDM5CP41229 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
KDM5CP41229 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC25.68■■□□□ 1.7
KDM5CP41229 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC25.68■■□□□ 1.7
KDM5CP41229 U1.21-201ENST00000580816 167 ntBASIC25.68■■□□□ 1.7
KDM5CP41229 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC25.68■■□□□ 1.7
KDM5CP41229 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
KDM5CP41229 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
KDM5CP41229 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
KDM5CP41229 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
KDM5CP41229 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC25.67■■□□□ 1.7
KDM5CP41229 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC25.67■■□□□ 1.7
KDM5CP41229 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC25.67■■□□□ 1.7
KDM5CP41229 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC25.67■■□□□ 1.7
KDM5CP41229 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC25.67■■□□□ 1.7
KDM5CP41229 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
KDM5CP41229 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC25.67■■□□□ 1.7
KDM5CP41229 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC25.67■■□□□ 1.7
KDM5CP41229 SPTLC1P1-201ENST00000447199 261 ntBASIC25.67■■□□□ 1.7
KDM5CP41229 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC25.67■■□□□ 1.7
KDM5CP41229 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC25.67■■□□□ 1.7
KDM5CP41229 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC25.67■■□□□ 1.7
KDM5CP41229 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC25.67■■□□□ 1.7
KDM5CP41229 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC25.67■■□□□ 1.7
KDM5CP41229 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC25.67■■□□□ 1.7
KDM5CP41229 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC25.67■■□□□ 1.7
KDM5CP41229 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
KDM5CP41229 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
KDM5CP41229 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC25.66■■□□□ 1.7
KDM5CP41229 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC25.66■■□□□ 1.7
KDM5CP41229 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC25.66■■□□□ 1.7
KDM5CP41229 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
KDM5CP41229 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
KDM5CP41229 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC25.66■■□□□ 1.7
KDM5CP41229 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC25.66■■□□□ 1.7
KDM5CP41229 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC25.66■■□□□ 1.7
KDM5CP41229 PIN1P1-201ENST00000412108 996 ntBASIC25.66■■□□□ 1.7
KDM5CP41229 NME2P1-201ENST00000426182 414 ntBASIC25.66■■□□□ 1.7
KDM5CP41229 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC25.66■■□□□ 1.7
KDM5CP41229 IGHV3-62-201ENST00000520057 340 ntBASIC25.66■■□□□ 1.7
KDM5CP41229 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC25.66■■□□□ 1.7
KDM5CP41229 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC25.66■■□□□ 1.7
KDM5CP41229 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC25.66■■□□□ 1.7
KDM5CP41229 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC25.66■■□□□ 1.7
KDM5CP41229 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC25.66■■□□□ 1.7
KDM5CP41229 AL031055.1-201ENST00000606362 631 ntBASIC25.66■■□□□ 1.7
KDM5CP41229 AC073592.8-201ENST00000624126 511 ntBASIC25.66■■□□□ 1.7
KDM5CP41229 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
KDM5CP41229 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC25.66■■□□□ 1.7
KDM5CP41229 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC25.66■■□□□ 1.7
KDM5CP41229 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC25.66■■□□□ 1.7
KDM5CP41229 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC25.66■■□□□ 1.7
KDM5CP41229 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
KDM5CP41229 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC25.66■■□□□ 1.7
KDM5CP41229 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC25.66■■□□□ 1.7
KDM5CP41229 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC25.66■■□□□ 1.7
KDM5CP41229 AC022144.1-201ENST00000602255 1580 ntBASIC25.66■■□□□ 1.7
KDM5CP41229 AP000997.3-201ENST00000623333 2250 ntBASIC25.66■■□□□ 1.7
KDM5CP41229 AC135776.1-201ENST00000319817 2481 ntBASIC25.66■■□□□ 1.7
KDM5CP41229 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
KDM5CP41229 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC25.65■■□□□ 1.7
KDM5CP41229 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC25.65■■□□□ 1.7
KDM5CP41229 SERF2-217ENST00000630046 862 ntTSL 5 BASIC25.65■■□□□ 1.7
KDM5CP41229 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC25.65■■□□□ 1.7
KDM5CP41229 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC25.65■■□□□ 1.7
KDM5CP41229 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC25.65■■□□□ 1.7
KDM5CP41229 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
KDM5CP41229 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
KDM5CP41229 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC25.65■■□□□ 1.7
KDM5CP41229 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC25.65■■□□□ 1.7
KDM5CP41229 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC25.65■■□□□ 1.7
KDM5CP41229 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
KDM5CP41229 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC25.65■■□□□ 1.7
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms