Protein–RNA interactions for Protein: P40939

HADHA, Trifunctional enzyme subunit alpha, mitochondrial, humanhuman

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HADHAP40939 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC17.59■□□□□ 0.41
HADHAP40939 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
HADHAP40939 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
HADHAP40939 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
HADHAP40939 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
HADHAP40939 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.41
HADHAP40939 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
HADHAP40939 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
HADHAP40939 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
HADHAP40939 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC17.58■□□□□ 0.41
HADHAP40939 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC17.58■□□□□ 0.41
HADHAP40939 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
HADHAP40939 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.41
HADHAP40939 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC17.58■□□□□ 0.41
HADHAP40939 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
HADHAP40939 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC17.58■□□□□ 0.41
HADHAP40939 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
HADHAP40939 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
HADHAP40939 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
HADHAP40939 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
HADHAP40939 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
HADHAP40939 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
HADHAP40939 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC17.58■□□□□ 0.4
HADHAP40939 LYSMD4-203ENST00000378904 2122 ntBASIC17.58■□□□□ 0.4
HADHAP40939 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
HADHAP40939 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
HADHAP40939 AC096582.2-201ENST00000510860 516 ntBASIC17.58■□□□□ 0.4
HADHAP40939 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC17.58■□□□□ 0.4
HADHAP40939 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC17.58■□□□□ 0.4
HADHAP40939 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC17.58■□□□□ 0.4
HADHAP40939 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC17.58■□□□□ 0.4
HADHAP40939 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC17.58■□□□□ 0.4
HADHAP40939 BNIP3P18-201ENST00000593976 575 ntBASIC17.58■□□□□ 0.4
HADHAP40939 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC17.58■□□□□ 0.4
HADHAP40939 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
HADHAP40939 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC17.58■□□□□ 0.4
HADHAP40939 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
HADHAP40939 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
HADHAP40939 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC17.58■□□□□ 0.4
HADHAP40939 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
HADHAP40939 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
HADHAP40939 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC17.58■□□□□ 0.4
HADHAP40939 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC17.58■□□□□ 0.4
HADHAP40939 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
HADHAP40939 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
HADHAP40939 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
HADHAP40939 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
HADHAP40939 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
HADHAP40939 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
HADHAP40939 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
HADHAP40939 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC17.58■□□□□ 0.4
HADHAP40939 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC17.57■□□□□ 0.4
HADHAP40939 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
HADHAP40939 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
HADHAP40939 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
HADHAP40939 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
HADHAP40939 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
HADHAP40939 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
HADHAP40939 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC17.57■□□□□ 0.4
HADHAP40939 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC17.57■□□□□ 0.4
HADHAP40939 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
HADHAP40939 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
HADHAP40939 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
HADHAP40939 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC17.57■□□□□ 0.4
HADHAP40939 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
HADHAP40939 KRT18P56-201ENST00000507275 550 ntBASIC17.57■□□□□ 0.4
HADHAP40939 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC17.57■□□□□ 0.4
HADHAP40939 AC109462.3-201ENST00000573934 613 ntBASIC17.57■□□□□ 0.4
HADHAP40939 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
HADHAP40939 AC114341.1-201ENST00000618070 349 ntBASIC17.57■□□□□ 0.4
HADHAP40939 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC17.57■□□□□ 0.4
HADHAP40939 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
HADHAP40939 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC17.57■□□□□ 0.4
HADHAP40939 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
HADHAP40939 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC17.57■□□□□ 0.4
HADHAP40939 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
HADHAP40939 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
HADHAP40939 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
HADHAP40939 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
HADHAP40939 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
HADHAP40939 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
HADHAP40939 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
HADHAP40939 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC17.56■□□□□ 0.4
HADHAP40939 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
HADHAP40939 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
HADHAP40939 AC022211.2-201ENST00000585075 2527 ntBASIC17.56■□□□□ 0.4
HADHAP40939 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC17.56■□□□□ 0.4
HADHAP40939 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
HADHAP40939 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC17.56■□□□□ 0.4
HADHAP40939 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC17.56■□□□□ 0.4
HADHAP40939 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC17.56■□□□□ 0.4
HADHAP40939 HCG4P8-203ENST00000443049 980 ntBASIC17.56■□□□□ 0.4
HADHAP40939 COX5A-204ENST00000567270 579 ntTSL 3 BASIC17.56■□□□□ 0.4
HADHAP40939 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC17.56■□□□□ 0.4
HADHAP40939 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC17.56■□□□□ 0.4
HADHAP40939 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC17.56■□□□□ 0.4
HADHAP40939 AC099336.1-202ENST00000602961 463 ntBASIC17.56■□□□□ 0.4
HADHAP40939 AC019129.2-201ENST00000609837 1235 ntBASIC17.56■□□□□ 0.4
HADHAP40939 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC17.56■□□□□ 0.4
HADHAP40939 AL139327.4-201ENST00000612362 153 ntBASIC17.56■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms