Protein–RNA interactions for Protein: P38606

ATP6V1A, V-type proton ATPase catalytic subunit A, humanhuman

Predictions only

Length 617 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V1AP38606 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
ATP6V1AP38606 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC21.96■■□□□ 1.11
ATP6V1AP38606 FLJ13224-201ENST00000313737 1514 ntBASIC21.96■■□□□ 1.11
ATP6V1AP38606 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
ATP6V1AP38606 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.11
ATP6V1AP38606 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.11
ATP6V1AP38606 PODN-203ENST00000395871 2744 ntTSL 5 BASIC21.95■■□□□ 1.1
ATP6V1AP38606 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
ATP6V1AP38606 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC21.95■■□□□ 1.1
ATP6V1AP38606 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC21.95■■□□□ 1.1
ATP6V1AP38606 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
ATP6V1AP38606 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
ATP6V1AP38606 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
ATP6V1AP38606 WRB-204ENST00000398753 699 ntTSL 3 BASIC21.95■■□□□ 1.1
ATP6V1AP38606 GSAP-205ENST00000430584 600 ntTSL 5 BASIC21.95■■□□□ 1.1
ATP6V1AP38606 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC21.95■■□□□ 1.1
ATP6V1AP38606 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC21.95■■□□□ 1.1
ATP6V1AP38606 PUDP-206ENST00000540122 825 ntTSL 2 BASIC21.95■■□□□ 1.1
ATP6V1AP38606 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC21.95■■□□□ 1.1
ATP6V1AP38606 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC21.95■■□□□ 1.1
ATP6V1AP38606 AL161645.1-201ENST00000622716 1255 ntBASIC21.95■■□□□ 1.1
ATP6V1AP38606 RAB34-224ENST00000636513 888 ntTSL 5 BASIC21.95■■□□□ 1.1
ATP6V1AP38606 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC21.95■■□□□ 1.1
ATP6V1AP38606 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
ATP6V1AP38606 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
ATP6V1AP38606 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC21.95■■□□□ 1.1
ATP6V1AP38606 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC21.95■■□□□ 1.1
ATP6V1AP38606 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC21.95■■□□□ 1.1
ATP6V1AP38606 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
ATP6V1AP38606 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC21.95■■□□□ 1.1
ATP6V1AP38606 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
ATP6V1AP38606 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC21.95■■□□□ 1.1
ATP6V1AP38606 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC21.94■■□□□ 1.1
ATP6V1AP38606 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
ATP6V1AP38606 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC21.94■■□□□ 1.1
ATP6V1AP38606 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
ATP6V1AP38606 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC21.94■■□□□ 1.1
ATP6V1AP38606 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
ATP6V1AP38606 METTL26-204ENST00000397665 558 ntTSL 2 BASIC21.94■■□□□ 1.1
ATP6V1AP38606 TREML5P-201ENST00000421694 576 ntBASIC21.94■■□□□ 1.1
ATP6V1AP38606 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC21.94■■□□□ 1.1
ATP6V1AP38606 IGHV3-62-201ENST00000520057 340 ntBASIC21.94■■□□□ 1.1
ATP6V1AP38606 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC21.94■■□□□ 1.1
ATP6V1AP38606 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
ATP6V1AP38606 LINC01225-203ENST00000563550 1244 ntBASIC21.94■■□□□ 1.1
ATP6V1AP38606 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
ATP6V1AP38606 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
ATP6V1AP38606 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC21.94■■□□□ 1.1
ATP6V1AP38606 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC21.94■■□□□ 1.1
ATP6V1AP38606 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC21.94■■□□□ 1.1
ATP6V1AP38606 AC008677.1-201ENST00000519230 1561 ntBASIC21.94■■□□□ 1.1
ATP6V1AP38606 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
ATP6V1AP38606 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
ATP6V1AP38606 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC21.94■■□□□ 1.1
ATP6V1AP38606 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC21.94■■□□□ 1.1
ATP6V1AP38606 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
ATP6V1AP38606 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC21.93■■□□□ 1.1
ATP6V1AP38606 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
ATP6V1AP38606 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
ATP6V1AP38606 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
ATP6V1AP38606 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
ATP6V1AP38606 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
ATP6V1AP38606 VMA21-202ENST00000370361 693 ntTSL 5 BASIC21.93■■□□□ 1.1
ATP6V1AP38606 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
ATP6V1AP38606 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC21.93■■□□□ 1.1
ATP6V1AP38606 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC21.93■■□□□ 1.1
ATP6V1AP38606 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC21.93■■□□□ 1.1
ATP6V1AP38606 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC21.93■■□□□ 1.1
ATP6V1AP38606 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC21.93■■□□□ 1.1
ATP6V1AP38606 AC026150.2-201ENST00000564693 1156 ntBASIC21.93■■□□□ 1.1
ATP6V1AP38606 AC140878.1-201ENST00000565277 250 ntBASIC21.93■■□□□ 1.1
ATP6V1AP38606 MNT-208ENST00000575394 606 ntTSL 4 BASIC21.93■■□□□ 1.1
ATP6V1AP38606 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC21.93■■□□□ 1.1
ATP6V1AP38606 UXT-AS1-201ENST00000590504 1525 ntBASIC21.93■■□□□ 1.1
ATP6V1AP38606 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
ATP6V1AP38606 YTHDF3-AS1-201ENST00000603538 718 ntBASIC21.93■■□□□ 1.1
ATP6V1AP38606 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
ATP6V1AP38606 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
ATP6V1AP38606 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC21.93■■□□□ 1.1
ATP6V1AP38606 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC21.93■■□□□ 1.1
ATP6V1AP38606 EML3-217ENST00000531557 2509 ntTSL 5 BASIC21.92■■□□□ 1.1
ATP6V1AP38606 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC21.92■■□□□ 1.1
ATP6V1AP38606 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC21.92■■□□□ 1.1
ATP6V1AP38606 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC21.92■■□□□ 1.1
ATP6V1AP38606 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
ATP6V1AP38606 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC21.92■■□□□ 1.1
ATP6V1AP38606 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC21.92■■□□□ 1.1
ATP6V1AP38606 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
ATP6V1AP38606 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC21.92■■□□□ 1.1
ATP6V1AP38606 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
ATP6V1AP38606 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
ATP6V1AP38606 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC21.92■■□□□ 1.1
ATP6V1AP38606 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC21.92■■□□□ 1.1
ATP6V1AP38606 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC21.92■■□□□ 1.1
ATP6V1AP38606 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC21.92■■□□□ 1.1
ATP6V1AP38606 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
ATP6V1AP38606 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
ATP6V1AP38606 BAD-202ENST00000394531 631 ntTSL 3 BASIC21.92■■□□□ 1.1
ATP6V1AP38606 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC21.92■■□□□ 1.1
ATP6V1AP38606 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC21.92■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 55.4 ms