Protein–RNA interactions for Protein: P29973

CNGA1, cGMP-gated cation channel alpha-1, humanhuman

Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1P29973 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
CNGA1P29973 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
CNGA1P29973 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CNGA1P29973 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC19.72■□□□□ 0.75
CNGA1P29973 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC19.71■□□□□ 0.75
CNGA1P29973 FLJ13224-201ENST00000313737 1514 ntBASIC19.71■□□□□ 0.75
CNGA1P29973 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CNGA1P29973 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
CNGA1P29973 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CNGA1P29973 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CNGA1P29973 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CNGA1P29973 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC19.71■□□□□ 0.75
CNGA1P29973 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CNGA1P29973 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
CNGA1P29973 CD99-202ENST00000381180 530 ntTSL 2 BASIC19.71■□□□□ 0.75
CNGA1P29973 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CNGA1P29973 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC19.71■□□□□ 0.75
CNGA1P29973 CIPC-205ENST00000555437 566 ntTSL 3 BASIC19.71■□□□□ 0.75
CNGA1P29973 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC19.71■□□□□ 0.75
CNGA1P29973 AC004835.2-201ENST00000603762 682 ntBASIC19.71■□□□□ 0.75
CNGA1P29973 AC023141.13-201ENST00000604991 943 ntBASIC19.71■□□□□ 0.75
CNGA1P29973 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC19.71■□□□□ 0.75
CNGA1P29973 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
CNGA1P29973 PC-208ENST00000529047 1607 ntTSL 3 BASIC19.71■□□□□ 0.75
CNGA1P29973 WAC-202ENST00000347934 2839 ntTSL 5 BASIC19.71■□□□□ 0.75
CNGA1P29973 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC19.71■□□□□ 0.75
CNGA1P29973 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC19.71■□□□□ 0.75
CNGA1P29973 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CNGA1P29973 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CNGA1P29973 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC19.71■□□□□ 0.75
CNGA1P29973 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CNGA1P29973 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CNGA1P29973 AC007613.1-201ENST00000572811 2597 ntBASIC19.71■□□□□ 0.75
CNGA1P29973 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
CNGA1P29973 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC19.71■□□□□ 0.75
CNGA1P29973 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CNGA1P29973 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CNGA1P29973 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
CNGA1P29973 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CNGA1P29973 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC19.7■□□□□ 0.74
CNGA1P29973 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
CNGA1P29973 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
CNGA1P29973 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CNGA1P29973 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC19.7■□□□□ 0.74
CNGA1P29973 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC19.7■□□□□ 0.74
CNGA1P29973 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CNGA1P29973 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CNGA1P29973 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
CNGA1P29973 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
CNGA1P29973 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CNGA1P29973 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC19.7■□□□□ 0.74
CNGA1P29973 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC19.7■□□□□ 0.74
CNGA1P29973 RHOQP3-201ENST00000437982 621 ntBASIC19.7■□□□□ 0.74
CNGA1P29973 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC19.7■□□□□ 0.74
CNGA1P29973 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CNGA1P29973 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC19.7■□□□□ 0.74
CNGA1P29973 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC19.7■□□□□ 0.74
CNGA1P29973 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CNGA1P29973 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC19.7■□□□□ 0.74
CNGA1P29973 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CNGA1P29973 AC019129.2-201ENST00000609837 1235 ntBASIC19.7■□□□□ 0.74
CNGA1P29973 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CNGA1P29973 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CNGA1P29973 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CNGA1P29973 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CNGA1P29973 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CNGA1P29973 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC19.7■□□□□ 0.74
CNGA1P29973 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC19.7■□□□□ 0.74
CNGA1P29973 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC19.7■□□□□ 0.74
CNGA1P29973 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CNGA1P29973 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC19.7■□□□□ 0.74
CNGA1P29973 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CNGA1P29973 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
CNGA1P29973 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
CNGA1P29973 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC19.7■□□□□ 0.74
CNGA1P29973 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CNGA1P29973 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC19.69■□□□□ 0.74
CNGA1P29973 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CNGA1P29973 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CNGA1P29973 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CNGA1P29973 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC19.69■□□□□ 0.74
CNGA1P29973 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CNGA1P29973 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CNGA1P29973 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC19.69■□□□□ 0.74
CNGA1P29973 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
CNGA1P29973 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
CNGA1P29973 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CNGA1P29973 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CNGA1P29973 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
CNGA1P29973 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CNGA1P29973 AP002414.1-201ENST00000391405 1147 ntBASIC19.69■□□□□ 0.74
CNGA1P29973 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC19.69■□□□□ 0.74
CNGA1P29973 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
CNGA1P29973 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CNGA1P29973 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC19.69■□□□□ 0.74
CNGA1P29973 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
CNGA1P29973 RNF34-208ENST00000555076 593 ntTSL 3 BASIC19.69■□□□□ 0.74
CNGA1P29973 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC19.69■□□□□ 0.74
CNGA1P29973 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC19.69■□□□□ 0.74
CNGA1P29973 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms