Protein–RNA interactions for Protein: P25067

COL8A2, Collagen alpha-2(VIII) chain, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A2P25067 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC14.67□□□□□ -0.06
COL8A2P25067 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC14.67□□□□□ -0.06
COL8A2P25067 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC14.67□□□□□ -0.06
COL8A2P25067 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
COL8A2P25067 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
COL8A2P25067 AC140113.2-201ENST00000604370 208 ntBASIC14.67□□□□□ -0.06
COL8A2P25067 AC027601.4-201ENST00000611259 610 ntBASIC14.67□□□□□ -0.06
COL8A2P25067 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
COL8A2P25067 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
COL8A2P25067 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
COL8A2P25067 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC14.67□□□□□ -0.06
COL8A2P25067 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
COL8A2P25067 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
COL8A2P25067 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
COL8A2P25067 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
COL8A2P25067 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC14.67□□□□□ -0.06
COL8A2P25067 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC14.67□□□□□ -0.06
COL8A2P25067 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
COL8A2P25067 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
COL8A2P25067 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
COL8A2P25067 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
COL8A2P25067 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
COL8A2P25067 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC14.67□□□□□ -0.06
COL8A2P25067 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
COL8A2P25067 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC14.66□□□□□ -0.06
COL8A2P25067 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
COL8A2P25067 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC14.66□□□□□ -0.06
COL8A2P25067 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
COL8A2P25067 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
COL8A2P25067 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC14.66□□□□□ -0.06
COL8A2P25067 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC14.66□□□□□ -0.06
COL8A2P25067 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC14.66□□□□□ -0.06
COL8A2P25067 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
COL8A2P25067 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
COL8A2P25067 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
COL8A2P25067 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC14.66□□□□□ -0.06
COL8A2P25067 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC14.66□□□□□ -0.06
COL8A2P25067 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
COL8A2P25067 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
COL8A2P25067 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
COL8A2P25067 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
COL8A2P25067 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
COL8A2P25067 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC14.66□□□□□ -0.06
COL8A2P25067 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
COL8A2P25067 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
COL8A2P25067 LBH-204ENST00000406087 559 ntTSL 4 BASIC14.66□□□□□ -0.06
COL8A2P25067 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
COL8A2P25067 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
COL8A2P25067 ARTN-206ENST00000472435 402 ntTSL 3 BASIC14.66□□□□□ -0.06
COL8A2P25067 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
COL8A2P25067 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC14.66□□□□□ -0.06
COL8A2P25067 AC080080.1-201ENST00000625121 2420 ntBASIC14.66□□□□□ -0.06
COL8A2P25067 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
COL8A2P25067 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
COL8A2P25067 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
COL8A2P25067 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
COL8A2P25067 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
COL8A2P25067 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
COL8A2P25067 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
COL8A2P25067 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
COL8A2P25067 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
COL8A2P25067 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC14.66□□□□□ -0.06
COL8A2P25067 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
COL8A2P25067 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC14.66□□□□□ -0.06
COL8A2P25067 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
COL8A2P25067 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC14.66□□□□□ -0.06
COL8A2P25067 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
COL8A2P25067 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC14.65□□□□□ -0.06
COL8A2P25067 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
COL8A2P25067 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC14.65□□□□□ -0.06
COL8A2P25067 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
COL8A2P25067 NME9-203ENST00000383180 2133 ntTSL 2 BASIC14.65□□□□□ -0.06
COL8A2P25067 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
COL8A2P25067 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC14.65□□□□□ -0.06
COL8A2P25067 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
COL8A2P25067 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
COL8A2P25067 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
COL8A2P25067 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
COL8A2P25067 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
COL8A2P25067 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
COL8A2P25067 LINC00982-205ENST00000420957 435 ntBASIC14.65□□□□□ -0.06
COL8A2P25067 MED15P5-201ENST00000423150 992 ntBASIC14.65□□□□□ -0.06
COL8A2P25067 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC14.65□□□□□ -0.06
COL8A2P25067 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC14.65□□□□□ -0.06
COL8A2P25067 ETFA-208ENST00000559602 792 ntTSL 3 BASIC14.65□□□□□ -0.06
COL8A2P25067 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC14.65□□□□□ -0.06
COL8A2P25067 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC14.65□□□□□ -0.06
COL8A2P25067 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
COL8A2P25067 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC14.65□□□□□ -0.06
COL8A2P25067 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
COL8A2P25067 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
COL8A2P25067 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
COL8A2P25067 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
COL8A2P25067 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
COL8A2P25067 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
COL8A2P25067 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
COL8A2P25067 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
COL8A2P25067 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
COL8A2P25067 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC14.65□□□□□ -0.06
COL8A2P25067 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms