Protein–RNA interactions for Protein: P24385

CCND1, G1/S-specific cyclin-D1, humanhuman

Predictions only

Length 295 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCND1P24385 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
CCND1P24385 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
CCND1P24385 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CCND1P24385 DDT-203ENST00000403754 569 ntTSL 3 BASIC17.53■□□□□ 0.4
CCND1P24385 DDT-206ENST00000430101 573 ntTSL 2 BASIC17.53■□□□□ 0.4
CCND1P24385 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CCND1P24385 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CCND1P24385 DUTP2-201ENST00000519164 463 ntBASIC17.53■□□□□ 0.4
CCND1P24385 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC17.53■□□□□ 0.4
CCND1P24385 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC17.53■□□□□ 0.4
CCND1P24385 NME3-204ENST00000563498 920 ntTSL 2 BASIC17.53■□□□□ 0.4
CCND1P24385 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC17.53■□□□□ 0.4
CCND1P24385 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC17.53■□□□□ 0.4
CCND1P24385 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC17.53■□□□□ 0.4
CCND1P24385 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC17.53■□□□□ 0.4
CCND1P24385 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
CCND1P24385 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CCND1P24385 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CCND1P24385 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CCND1P24385 AL355312.1-201ENST00000407115 2176 ntBASIC17.53■□□□□ 0.4
CCND1P24385 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CCND1P24385 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CCND1P24385 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CCND1P24385 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CCND1P24385 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
CCND1P24385 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC17.53■□□□□ 0.4
CCND1P24385 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC17.53■□□□□ 0.4
CCND1P24385 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
CCND1P24385 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
CCND1P24385 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC17.52■□□□□ 0.4
CCND1P24385 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC17.52■□□□□ 0.4
CCND1P24385 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
CCND1P24385 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC17.52■□□□□ 0.4
CCND1P24385 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CCND1P24385 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CCND1P24385 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CCND1P24385 AC022898.2-201ENST00000616822 1312 ntBASIC17.52■□□□□ 0.4
CCND1P24385 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
CCND1P24385 BANP-201ENST00000286122 2368 ntTSL 5 BASIC17.52■□□□□ 0.4
CCND1P24385 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CCND1P24385 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
CCND1P24385 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CCND1P24385 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC17.52■□□□□ 0.4
CCND1P24385 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
CCND1P24385 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CCND1P24385 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CCND1P24385 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CCND1P24385 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CCND1P24385 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
CCND1P24385 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CCND1P24385 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
CCND1P24385 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CCND1P24385 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC17.52■□□□□ 0.4
CCND1P24385 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CCND1P24385 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC17.52■□□□□ 0.4
CCND1P24385 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC17.52■□□□□ 0.4
CCND1P24385 AP003733.1-201ENST00000491725 852 ntBASIC17.52■□□□□ 0.4
CCND1P24385 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
CCND1P24385 AL590326.2-201ENST00000625139 305 ntBASIC17.52■□□□□ 0.4
CCND1P24385 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CCND1P24385 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC17.52■□□□□ 0.4
CCND1P24385 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.4
CCND1P24385 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CCND1P24385 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CCND1P24385 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
CCND1P24385 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
CCND1P24385 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CCND1P24385 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
CCND1P24385 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC17.52■□□□□ 0.39
CCND1P24385 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.39
CCND1P24385 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC17.52■□□□□ 0.39
CCND1P24385 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.39
CCND1P24385 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC17.52■□□□□ 0.39
CCND1P24385 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.39
CCND1P24385 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
CCND1P24385 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
CCND1P24385 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
CCND1P24385 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC17.52■□□□□ 0.39
CCND1P24385 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
CCND1P24385 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
CCND1P24385 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
CCND1P24385 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC17.51■□□□□ 0.39
CCND1P24385 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
CCND1P24385 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
CCND1P24385 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC17.51■□□□□ 0.39
CCND1P24385 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CCND1P24385 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC17.51■□□□□ 0.39
CCND1P24385 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CCND1P24385 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
CCND1P24385 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CCND1P24385 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
CCND1P24385 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CCND1P24385 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
CCND1P24385 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CCND1P24385 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CCND1P24385 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC17.51■□□□□ 0.39
CCND1P24385 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CCND1P24385 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC17.51■□□□□ 0.39
CCND1P24385 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CCND1P24385 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC17.51■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms