Protein–RNA interactions for Protein: P22894

MMP8, Neutrophil collagenase, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP8P22894 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
MMP8P22894 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
MMP8P22894 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
MMP8P22894 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
MMP8P22894 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
MMP8P22894 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
MMP8P22894 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
MMP8P22894 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
MMP8P22894 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
MMP8P22894 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
MMP8P22894 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
MMP8P22894 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
MMP8P22894 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
MMP8P22894 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
MMP8P22894 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
MMP8P22894 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
MMP8P22894 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
MMP8P22894 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC18.23■□□□□ 0.51
MMP8P22894 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC18.23■□□□□ 0.51
MMP8P22894 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
MMP8P22894 PRELID1P1-202ENST00000567272 903 ntBASIC18.23■□□□□ 0.51
MMP8P22894 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC18.23■□□□□ 0.51
MMP8P22894 CYB561-217ENST00000582997 877 ntTSL 5 BASIC18.23■□□□□ 0.51
MMP8P22894 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
MMP8P22894 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC18.23■□□□□ 0.51
MMP8P22894 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
MMP8P22894 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC18.23■□□□□ 0.51
MMP8P22894 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
MMP8P22894 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC18.23■□□□□ 0.51
MMP8P22894 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
MMP8P22894 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
MMP8P22894 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
MMP8P22894 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
MMP8P22894 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
MMP8P22894 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
MMP8P22894 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC18.23■□□□□ 0.51
MMP8P22894 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
MMP8P22894 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
MMP8P22894 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
MMP8P22894 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
MMP8P22894 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC18.22■□□□□ 0.51
MMP8P22894 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
MMP8P22894 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC18.22■□□□□ 0.51
MMP8P22894 GID4-202ENST00000376345 1391 ntTSL 3 BASIC18.22■□□□□ 0.51
MMP8P22894 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
MMP8P22894 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
MMP8P22894 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
MMP8P22894 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
MMP8P22894 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
MMP8P22894 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC18.22■□□□□ 0.51
MMP8P22894 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC18.22■□□□□ 0.51
MMP8P22894 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
MMP8P22894 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC18.22■□□□□ 0.51
MMP8P22894 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
MMP8P22894 S100A2-206ENST00000497140 697 ntTSL 2 BASIC18.22■□□□□ 0.51
MMP8P22894 TPM1-218ENST00000559281 851 ntTSL 5 BASIC18.22■□□□□ 0.51
MMP8P22894 AC091304.2-201ENST00000564639 760 ntBASIC18.22■□□□□ 0.51
MMP8P22894 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC18.22■□□□□ 0.51
MMP8P22894 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
MMP8P22894 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
MMP8P22894 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
MMP8P22894 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC18.22■□□□□ 0.51
MMP8P22894 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
MMP8P22894 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC18.22■□□□□ 0.51
MMP8P22894 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC18.22■□□□□ 0.51
MMP8P22894 AC097637.2-201ENST00000624096 1997 ntBASIC18.22■□□□□ 0.51
MMP8P22894 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC18.22■□□□□ 0.51
MMP8P22894 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
MMP8P22894 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
MMP8P22894 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
MMP8P22894 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
MMP8P22894 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
MMP8P22894 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
MMP8P22894 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC18.21■□□□□ 0.51
MMP8P22894 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
MMP8P22894 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
MMP8P22894 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC18.21■□□□□ 0.51
MMP8P22894 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC18.21■□□□□ 0.51
MMP8P22894 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
MMP8P22894 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC18.21■□□□□ 0.51
MMP8P22894 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
MMP8P22894 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
MMP8P22894 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
MMP8P22894 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
MMP8P22894 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
MMP8P22894 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
MMP8P22894 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
MMP8P22894 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC18.21■□□□□ 0.51
MMP8P22894 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC18.21■□□□□ 0.51
MMP8P22894 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC18.21■□□□□ 0.51
MMP8P22894 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
MMP8P22894 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
MMP8P22894 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC18.21■□□□□ 0.51
MMP8P22894 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
MMP8P22894 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
MMP8P22894 NF2-208ENST00000403435 2568 ntTSL 5 BASIC18.21■□□□□ 0.51
MMP8P22894 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC18.21■□□□□ 0.51
MMP8P22894 STX3-203ENST00000529177 1571 ntTSL 2 BASIC18.21■□□□□ 0.51
MMP8P22894 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
MMP8P22894 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC18.21■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms